RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 POMT2Q9UKY4 750 aa23.52■■□□□ 1.36
UBE2E3-213ENST00000602959 PCDHB11Q9Y5F2 797 aa23.52■■□□□ 1.36
UBE2E3-213ENST00000602959 H3BMM5 538 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 SMAPO00193 183 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 KPNA5O15131 536 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 POLR1CO15160 346 aaPredicted RBP23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 ESR1P03372 595 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 PGAM1P18669 254 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 POLR2CP19387 275 aaPredicted RBP23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 CASQ1P31415 396 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 KPNA2P52292 529 aaKnown RBP23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 SH3BP2P78314 561 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 PRKG2Q13237 762 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 LONRF1Q17RB8 773 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 ZNF470Q6ECI4 717 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 AMIGO1Q86WK6 493 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 LMNTD2Q8IXW0 634 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 SNRNP27Q8WVK2 155 aaKnown RBP23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 CCNL2Q96S94 520 aaPredicted RBP23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 SPRY4Q9C004 299 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 ICKQ9UPZ9 632 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 FAM169AQ9Y6X4 670 aa23.51■■□□□ 1.35
UBE2E3-213ENST00000602959 BTN3A3O00478 584 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 BTN3A1O00481 513 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 FMO4P31512 558 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 FOXM1Q08050 763 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 DHX9Q08211 1270 aaKnown RBP23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 THOC5Q13769 683 aaKnown RBP23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 IL11RAQ14626 422 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 HIBCHQ6NVY1 386 aaPredicted RBP23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 SYT10Q6XYQ8 523 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 KRT12Q99456 494 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 NRTNQ99748 197 aa23.5■■□□□ 1.35
UBE2E3-213ENST00000602959 SEC31AO94979 1220 aaKnown RBP23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 TTC4O95801 387 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 S1PR4O95977 384 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 SHMT2P34897 504 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 CXADRP78310 365 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 CRYMQ14894 314 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 MSS51Q4VC12 460 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 PLEKHS1Q5SXH7 462 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 CYB5D1Q6P9G0 228 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 UNC5DQ6UXZ4 953 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 OTOAQ7RTW8 1153 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 ADGRF3Q8IZF5 1079 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 CALML6Q8TD86 181 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 SNF8Q96H20 258 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 OR6C1Q96RD1 312 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 EBNA1BP2Q99848 306 aaKnown RBP23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 NAT9Q9BTE0 207 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 XKR8Q9H6D3 395 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 CPNE5Q9HCH3 593 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 C20orf96Q9NUD7 363 aaPredicted RBP23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 PILRAQ9UKJ1 303 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 CRYL1Q9Y2S2 319 aa23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 TMEM184BQ9Y519 407 aaPredicted RBP23.49■■□□□ 1.35
UBE2E3-213ENST00000602959 LOC400499M0QZD8 3231 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 NIPSNAP2O75323 286 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 BANF1O75531 89 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 ZBTB11O95625 1053 aaPredicted RBP23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 RPN2P04844 631 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 TPBGLP0DKB5 382 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 HSD11B2P80365 405 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 VAC14Q08AM6 782 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 ZNF789Q5FWF6 425 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 GPR155Q7Z3F1 870 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 DENND6AQ8IWF6 608 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 PDIK1LQ8N165 341 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 D2HGDHQ8N465 521 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 SIDT2Q8NBJ9 832 aaKnown RBP23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 SPATA4Q8NEY3 305 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 NKD1Q969G9 470 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 FAM167BQ9BTA0 163 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 PITPNM3Q9BZ71 974 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 TWSG1Q9GZX9 223 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 C1GALT1Q9NS00 363 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 BTRCQ9Y297 605 aa23.48■■□□□ 1.35
UBE2E3-213ENST00000602959 GSAPA4D1B5 854 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 K7ENP7 123 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 TP73O15350 636 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 KDM1AO60341 852 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 FGF5P12034 268 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 PKMP14618 531 aaKnown RBP23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 PRDX3P30048 256 aaKnown RBP23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 SLC1A2P43004 574 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 ATP1A2P50993 1020 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 ITGA8P53708 1063 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 CTBP1Q13363 440 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 GBX1Q14549 363 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 INO80CQ6PI98 192 aaPredicted RBP23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 CCDC81Q6ZN84 652 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 KCNMB4Q86W47 210 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 DCUN1D3Q8IWE4 304 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 PPM1MQ96MI6 270 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 LATS2Q9NRM7 1088 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 OR6C2Q9NZP2 312 aa23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 TDRKHQ9Y2W6 561 aaKnown RBP23.47■■□□□ 1.35
UBE2E3-213ENST00000602959 EFCAB8A8MWE9 144 aa23.46■■□□□ 1.35
UBE2E3-213ENST00000602959 C2orf74A8MZ97 194 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms