RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CD163L1Q9NR16 1453 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 A0A096LPE4 126 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 A0A1W2PPZ6 126 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TRIM49BA6NDI0 452 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 DBX1A6NMT0 343 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 C12orf71A8MTZ7 269 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 H3BM21 787 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 H7C1Q1 480 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 GFRA2O00451 464 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PEX12O00623 359 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 AQP7O14520 342 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TERTO14746 1132 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ITM2AO43736 263 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MYO1DO94832 1006 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SEMA3DO95025 777 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SNAP29O95721 258 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 AHSGP02765 367 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 IFNA16P05015 189 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 HTR7P34969 479 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 HSD17B3P37058 310 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ARL1P40616 181 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SLCO1A2P46721 670 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CASP4P49662 377 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 FLT3LGP49771 235 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 UCP2P55851 309 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 EIF3BP55884 814 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 KCNQ4P56696 695 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TARDBPQ13148 414 aaKnown RBP eCLIP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PNOCQ13519 176 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC15A2Q16348 729 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 HIF1AQ16665 826 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TNFAIP8L3Q5GJ75 292 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 THEM4Q5T1C6 240 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 BEND3Q5T5X7 828 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 NANOGP8Q6NSW7 305 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LRFN4Q6PJG9 635 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SCARA5Q6ZMJ2 495 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 GSTA5Q7RTV2 222 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM131BQ86XD5 332 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CLYBLQ8N0X4 340 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SETD9Q8NE22 299 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CATSPER1Q8NEC5 780 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 NCOA7Q8NI08 942 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ZCCHC14Q8WYQ9 949 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 POMGNT1Q8WZA1 660 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SNX19Q92543 992 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ISG20Q96AZ6 181 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 DAZAP1Q96EP5 407 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 C7orf34Q96L11 122 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 HEXIM2Q96MH2 286 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MGME1Q9BQP7 344 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RTKNQ9BST9 563 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TUBB6Q9BUF5 446 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 NELFAQ9H3P2 528 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SETD4Q9NVD3 440 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TAS2R10Q9NYW0 307 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CD300AQ9UGN4 299 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LIMA1Q9UHB6 759 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CYB5R1Q9UHQ9 305 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ANAPC2Q9UJX6 822 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CDH7Q9ULB5 785 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MINPP1Q9UNW1 487 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 GINS2Q9Y248 185 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC9A8Q9Y2E8 581 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MTO1Q9Y2Z2 717 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 EMC9Q9Y3B6 208 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CLIC4Q9Y696 253 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LTBP1Q14766 1721 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LAD1O00515 517 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TEX33O43247 280 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 KRT36O76013 467 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CDK14O94921 469 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CALB1P05937 261 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PGK2P07205 417 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 INHBBP09529 407 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM58BPP0C7Q3 252 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CMA1P23946 247 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CCNE1P24864 410 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 HOXC8P31273 242 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 AKT2P31751 481 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LTBRP36941 435 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SIGLEC14Q08ET2 396 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 KLF10Q13118 480 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 APOFQ13790 326 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RUNX2Q13950 521 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 BAK1Q16611 211 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PRICKLE4Q2TBC4 344 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM153CQ494X1 144 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF311Q5JNZ3 666 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 METAP1DQ6UB28 335 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 G2E3Q7L622 706 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PDSS2Q86YH6 399 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 BBS7Q8IWZ6 715 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF610Q8N9Z0 462 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TTC29Q8NA56 475 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ELP5Q8TE02 316 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TRUB1Q8WWH5 349 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM122AQ96E09 287 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 UBAC1Q9BSL1 405 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MCMBPQ9BTE3 642 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms