RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 HABP4Q5JVS0 413 aaKnown RBP19.6■□□□□ 0.73
PNKP-214ENST00000600573 GTF2H2CQ6P1K8 395 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 GPRIN3Q6ZVF9 776 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 HEATR4Q86WZ0 1026 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 SCUBE1Q8IWY4 988 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 TP53I13Q8NBR0 393 aaPredicted RBP19.6■□□□□ 0.73
PNKP-214ENST00000600573 HM13Q8TCT9 377 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 ERLEC1Q96DZ1 483 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 MRGPRX1Q96LB2 322 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 MAGEB10Q96LZ2 347 aaPredicted RBP19.6■□□□□ 0.73
PNKP-214ENST00000600573 LENG8Q96PV6 779 aaPredicted RBP19.6■□□□□ 0.73
PNKP-214ENST00000600573 POLMQ9NP87 494 aaPredicted RBP19.6■□□□□ 0.73
PNKP-214ENST00000600573 DUSP12Q9UNI6 340 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 ZFR2Q9UPR6 939 aaKnown RBP19.6■□□□□ 0.73
PNKP-214ENST00000600573 MRPS17Q9Y2R5 130 aaKnown RBP19.6■□□□□ 0.73
PNKP-214ENST00000600573 ANGPTL3Q9Y5C1 460 aa19.6■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3DA0A087WVF3 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3IA0A087WXS9 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3EA0A087X179 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3KA0A087X1G2 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 A0A1W2PQU0 124 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3FA6NER0 549 aaPredicted RBP19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3LB9A6J9 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TAPBPO15533 448 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 KCNJ13O60928 360 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 POP7O75817 140 aaKnown RBP19.59■□□□□ 0.73
PNKP-214ENST00000600573 HOXC4P09017 264 aaPredicted RBP19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3HP0C7X1 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 ZNF8P17098 575 aaPredicted RBP19.59■□□□□ 0.73
PNKP-214ENST00000600573 CCND1P24385 295 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 CYLC2Q14093 348 aaPredicted RBP19.59■□□□□ 0.73
PNKP-214ENST00000600573 MAPRE2Q15555 327 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3GQ6DHY5 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3CQ6IPX1 549 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 LRRC70Q7Z2Q7 622 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 CACUL1Q86Y37 369 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 TBC1D3Q8IZP1 549 aaPredicted RBP19.59■□□□□ 0.73
PNKP-214ENST00000600573 PLA2G15Q8NCC3 412 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 CCDC138Q96M89 665 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 THTPAQ9BU02 230 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 SLC32A1Q9H598 525 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 DENND2DQ9H6A0 471 aaPredicted RBP19.59■□□□□ 0.73
PNKP-214ENST00000600573 WDR26Q9H7D7 661 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 DNAJC15Q9Y5T4 150 aa19.59■□□□□ 0.73
PNKP-214ENST00000600573 SHISA7A6NL88 538 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 H3BM21 787 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 PPP6CO00743 305 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 PIP5K1BO14986 540 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 PAK4O96013 591 aaPredicted RBP19.58■□□□□ 0.73
PNKP-214ENST00000600573 EPB42P16452 691 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 LRRC32Q14392 662 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 FBXO48Q5FWF7 155 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 C6orf163Q5TEZ5 329 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 Q7L0L9 218 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 GOLGA7Q7Z5G4 137 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 SYVN1Q86TM6 617 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 LRRTM4Q86VH4 590 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 VRK3Q8IV63 474 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 CFAP206Q8IYR0 622 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 ULK2Q8IYT8 1036 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 DENND6BQ8NEG7 585 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 ATP6V1E2Q96A05 226 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 FBXL8Q96CD0 374 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 NOL11Q9H8H0 719 aaKnown RBP19.58■□□□□ 0.73
PNKP-214ENST00000600573 SGK2Q9HBY8 427 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 XIRP2A4UGR9 3374 aa19.58■□□□□ 0.73
PNKP-214ENST00000600573 LOC100653049A0A140TA62 436 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 CHURC1-FNTBB4DL54 471 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 KMOO15229 486 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 KRT34O76011 436 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 LMNAP02545 664 aaKnown RBP19.58■□□□□ 0.72
PNKP-214ENST00000600573 ITGAXP20702 1163 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 HSPA7P48741 367 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 DGKEP52429 567 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 SLC25A3Q00325 362 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 INPP5AQ14642 412 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 IRF4Q15306 451 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 RNF165Q6ZSG1 346 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 LARP4Q71RC2 724 aaKnown RBP eCLIP19.58■□□□□ 0.72
PNKP-214ENST00000600573 NET1Q7Z628 596 aaPredicted RBP19.58■□□□□ 0.72
PNKP-214ENST00000600573 DDIASQ8IXT1 998 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 KCNA7Q96RP8 456 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 NTMT1Q9BV86 223 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 IPPKQ9H8X2 491 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 NDE1Q9NXR1 346 aa19.58■□□□□ 0.72
PNKP-214ENST00000600573 LRRC72A6NJI9 287 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 CCNT2O60583 730 aaKnown RBP19.57■□□□□ 0.72
PNKP-214ENST00000600573 PEX11AO75192 247 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 EBLN1P0CF75 366 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 MYCLP1P12525 358 aaPredicted RBP19.57■□□□□ 0.72
PNKP-214ENST00000600573 CCNG1P51959 295 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 FOXA1P55317 472 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 STX1BP61266 288 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 C16orf89Q6UX73 402 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 TRIM74Q86UV6 250 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 AMZ2Q86W34 360 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 TRIM69Q86WT6 500 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 OXR1Q8N573 874 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 TMEM79Q9BSE2 394 aa19.57■□□□□ 0.72
PNKP-214ENST00000600573 ITM2CQ9NQX7 267 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms