RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SLC2A4P14672 509 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 ACADLP28330 430 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 EIF2S3P41091 472 aaKnown RBP18.4■□□□□ 0.54
CCDC9-205ENST00000600117 SLC19A1P41440 591 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 MSH2P43246 934 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 UBE2IP63279 158 aaKnown RBP18.4■□□□□ 0.54
CCDC9-205ENST00000600117 KIR2DS5Q14953 304 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 C14orf28Q4W4Y0 310 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 ACSBG2Q5FVE4 666 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 DHRS13Q6UX07 377 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 INPP5DQ92835 1189 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 INSM2Q96T92 566 aaPredicted RBP18.4■□□□□ 0.54
CCDC9-205ENST00000600117 TRMT6Q9UJA5 497 aaKnown RBP18.4■□□□□ 0.54
CCDC9-205ENST00000600117 ZNF180Q9UJW8 692 aa18.4■□□□□ 0.54
CCDC9-205ENST00000600117 OR52A4PA6NMU1 304 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 WISP3O95389 354 aaPredicted RBP18.39■□□□□ 0.53
CCDC9-205ENST00000600117 NUDT17P0C025 328 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 SLC35G4P0C7Q5 338 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 ATP5DP30049 168 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 POU4F1Q01851 419 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 BMPR2Q13873 1038 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 RPE65Q16518 533 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 CCDC157Q569K6 752 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 UGT3A1Q6NUS8 523 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 PAQR3Q6TCH7 311 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 CEP97Q8IW35 865 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 CPNE9Q8IYJ1 553 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 ARL14Q8N4G2 192 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 CNDP2Q96KP4 475 aaKnown RBP18.39■□□□□ 0.53
CCDC9-205ENST00000600117 CAB39LQ9H9S4 337 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 SLC39A10Q9ULF5 831 aa18.39■□□□□ 0.53
CCDC9-205ENST00000600117 LDOC1O95751 146 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 MTHFD1P11586 935 aaKnown RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 CKMT1AP12532 417 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 XRCC1P18887 633 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 SAT1P21673 171 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 SKIV2L2P42285 1042 aaKnown RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 HALP42357 657 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 FASLGP48023 281 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 SERPINB9P50453 376 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 CSRP3P50461 194 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 ZNF460Q14592 562 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 NR0B2Q15466 257 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 ZKSCAN8Q15776 578 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 TTLL9Q3SXZ7 439 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 BEND6Q5SZJ8 279 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 DUS1LQ6P1R4 473 aaKnown RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 ADGRD1Q6QNK2 874 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 TMEM207Q6UWW9 146 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 MAPK15Q8TD08 544 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 C12orf66Q96MD2 445 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 FTSJ1Q9UET6 329 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 SLC24A2Q9UI40 661 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 PADI4Q9UM07 663 aa18.38■□□□□ 0.53
CCDC9-205ENST00000600117 CFAP20Q9Y6A4 193 aaKnown RBP18.38■□□□□ 0.53
CCDC9-205ENST00000600117 PRAMEF33A0A0G2JMD5 474 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 EIF3FO00303 357 aaPredicted RBP18.37■□□□□ 0.53
CCDC9-205ENST00000600117 RRP8O43159 456 aaKnown RBP18.37■□□□□ 0.53
CCDC9-205ENST00000600117 TLX3O43711 291 aaPredicted RBP18.37■□□□□ 0.53
CCDC9-205ENST00000600117 ERLIN1O75477 346 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 TCEA3O75764 348 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 TSPAN12O95859 305 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 CBSLP0DN79 551 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 CBSP35520 551 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 PDAP1Q13442 181 aaKnown RBP18.37■□□□□ 0.53
CCDC9-205ENST00000600117 USP10Q14694 798 aaKnown RBP18.37■□□□□ 0.53
CCDC9-205ENST00000600117 GUSBP11Q6P575 273 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 CYHR1Q6ZMK1 362 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 RASGRP3Q8IV61 690 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 OR2W6PQ8NHA6 318 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 CCDC77Q9BR77 488 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 POPDC3Q9HBV1 291 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 IMP3Q9NV31 184 aaKnown RBP18.37■□□□□ 0.53
CCDC9-205ENST00000600117 NCKIPSDQ9NZQ3 722 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 CPNE7Q9UBL6 633 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 IKBKGQ9Y6K9 419 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 RNF215Q9Y6U7 377 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 PIEZO2Q9H5I5 2752 aa18.37■□□□□ 0.53
CCDC9-205ENST00000600117 EME2A4GXA9 379 aaPredicted RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 CYSRT1A8MQ03 144 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 J3QKU1 62 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 IFRD1O00458 451 aaPredicted RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 PPM1DO15297 605 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 PHGDHO43175 533 aaKnown RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 MPC1LP0DKB6 136 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 ENO3P13929 434 aaPredicted RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 ZNF37AP17032 561 aaPredicted RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 CKMT2P17540 419 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 RPIAP49247 311 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 PTPN13Q12923 2485 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 DNAJC3Q13217 504 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 MROH9Q5TGP6 573 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 NEK10Q6ZWH5 1172 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 CMC1Q7Z7K0 106 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 SLC9B2Q86UD5 537 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 TDRPQ86YL5 185 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 EEF1AKMT1Q8WVE0 214 aa18.36■□□□□ 0.53
CCDC9-205ENST00000600117 TFGQ92734 400 aaPredicted RBP18.36■□□□□ 0.53
CCDC9-205ENST00000600117 ISL2Q96A47 359 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms