RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 ITIH1P19827 911 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 CCND1P24385 295 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 ALDH3A1P30838 453 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 NSG1P42857 185 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 MAGEA4P43358 317 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 MAGEA6P43360 314 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 PREPP48147 710 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 CSE1LP55060 971 aaKnown RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 NCALDP61601 193 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 GPR18Q14330 331 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 C16orf72Q14CZ0 275 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 SETDB1Q15047 1291 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 RPE65Q16518 533 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 SPDYAQ5MJ70 313 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 AGAP9Q5VTM2 703 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 METRNLQ641Q3 311 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 RGS9BPQ6ZS82 235 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 TMEM26Q6ZUK4 368 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 RAB11FIP2Q7L804 512 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 PCGF5Q86SE9 256 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 SLITRK4Q8IW52 837 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 FBXO39Q8N4B4 442 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 ANKRD42Q8N9B4 389 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 NAT8LQ8N9F0 302 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 WDR36Q8NI36 951 aaKnown RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 HM13Q8TCT9 377 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 MGARPQ8TDB4 240 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 KLHL29Q96CT2 875 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 NAF1Q96HR8 494 aaKnown RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 RMDN2Q96LZ7 410 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 C12orf66Q96MD2 445 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 CCM2Q9BSQ5 444 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 TREX1Q9NSU2 369 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 ABCF3Q9NUQ8 709 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 POT1Q9NUX5 634 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 NOP53Q9NZM5 478 aaKnown RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 IL1RAPL1Q9NZN1 696 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 PISDQ9UG56 409 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 FETUBQ9UGM5 382 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 SLC24A2Q9UI40 661 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 RIMKLBQ9ULI2 386 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 SOX13Q9UN79 622 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 LOXL2Q9Y4K0 774 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 TP73O15350 636 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 CD3EAPO15446 510 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 PRPF4O43172 522 aaKnown RBP eCLIP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 HNRNPCL1O60812 293 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 BANF1O75531 89 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 DCTN3O75935 186 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 TNFSF15O95150 251 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 F7P08709 466 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 MTHFD1P11586 935 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 RBMS1P29558 406 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 PDHA2P29803 388 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 CCKBRP32239 447 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 PHBP35232 272 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 LSSP48449 732 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 MAPK10P53779 464 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 GPLD1P80108 840 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 ZFP36L1Q07352 338 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 BOP1Q14137 746 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 MORF4L2Q15014 288 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 PLCL1Q15111 1095 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 RNASEH2BQ5TBB1 312 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 WASH2PQ6VEQ5 465 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 TBC1D1Q86TI0 1168 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 PPIL6Q8IXY8 311 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 ELMO1Q92556 727 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 RSC1A1Q92681 617 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 ZNF669Q96BR6 464 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 LIN37Q96GY3 246 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 PRR11Q96HE9 360 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 LINC00615Q96LM1 132 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 TTC1Q99614 292 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 KIFC1Q9BW19 673 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 COG4Q9H9E3 785 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 SSU72Q9NP77 194 aaKnown RBP11.79□□□□□ -0.52
ZNF548-209ENST00000598895 WASH6PQ9NQA3 447 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 BATF3Q9NR55 127 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 MAD1L1Q9Y6D9 718 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 FRYQ5TBA9 3013 aa11.79□□□□□ -0.52
ZNF548-209ENST00000598895 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 EXOC1LA0A1B0GW35 172 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 UBA6A0AVT1 1052 aaPredicted RBP11.78□□□□□ -0.52
ZNF548-209ENST00000598895 LILRA5A6NI73 299 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 IQCF5A8MTL0 148 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 PLD2O14939 933 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 UBXN7O94888 489 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 OR56A5P0C7T3 313 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 JMJD7P0C870 316 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 CCL4P13236 92 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 AMD1P17707 334 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 ARNTP27540 789 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 ETV5P41161 510 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 RASSF2P50749 326 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 LIMK2P53671 638 aa11.78□□□□□ -0.52
ZNF548-209ENST00000598895 EPHA4P54764 986 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms