RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 NKAPQ8N5F7 415 aaKnown RBP21.55■■□□□ 1.04
CHMP2A-204ENST00000597848 DHRS4Q9BTZ2 278 aa21.55■■□□□ 1.04
CHMP2A-204ENST00000597848 ABCG4Q9H172 646 aa21.55■■□□□ 1.04
CHMP2A-204ENST00000597848 SYNDIG1Q9H7V2 258 aa21.55■■□□□ 1.04
CHMP2A-204ENST00000597848 DLL3Q9NYJ7 618 aa21.55■■□□□ 1.04
CHMP2A-204ENST00000597848 CEP250Q9BV73 2442 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 HMX2A2RU54 273 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 RFPL3O75679 317 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 GP1BAP07359 652 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 SNRPAP09012 282 aaKnown RBP21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 ZNF37AP17032 561 aaPredicted RBP21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 CRABP2P29373 138 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 GPR3P46089 330 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 SLCO1A2P46721 670 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 ILKQ13418 452 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 AMZ1Q400G9 498 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 TMEM207Q6UWW9 146 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 CYHR1Q6ZMK1 362 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 OR2W6PQ8NHA6 318 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 OR5K2Q8NHB8 316 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 ZFPM2Q8WW38 1151 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 JPH3Q8WXH2 748 aaPredicted RBP21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 TBC1D10AQ9BXI6 508 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 KIR3DX1Q9H7L2 352 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 UCK1Q9HA47 277 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 PSMC3IPQ9P2W1 217 aaPredicted RBP21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 POLG2Q9UHN1 485 aa21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 APOBEC2Q9Y235 224 aaKnown RBP21.54■■□□□ 1.04
CHMP2A-204ENST00000597848 TRIM49D1C9J1S8 452 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 B4GAT1O43505 415 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 MATN4O95460 622 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 NUDT17P0C025 328 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 FTH1P19P0C7X4 201 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 TYK2P29597 1187 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 SERPINB8P50452 374 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 CCL7P80098 99 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 PUM1Q14671 1186 aaKnown RBP eCLIP21.53■■□□□ 1.045e-9■□□□□ 9
CHMP2A-204ENST00000597848 ZKSCAN8Q15776 578 aaPredicted RBP21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 SPRED1Q7Z699 444 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 SLCO6A1Q86UG4 719 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 AHCYL2Q96HN2 611 aaKnown RBP21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 PPCSQ9HAB8 311 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 SNX15Q9NRS6 342 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 TBK1Q9UHD2 729 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 TLK1Q9UKI8 766 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 PLAAQ9Y263 795 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 PCDHGA1Q9Y5H4 931 aa21.53■■□□□ 1.04
CHMP2A-204ENST00000597848 IQANK1A0A1B0GTG1 560 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 TLDC2A0PJX2 215 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 CATP04040 527 aaKnown RBP21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 RPLP0P05388 317 aaKnown RBP21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 AMD1P17707 334 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 CCNFP41002 786 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 BDKRB1P46663 353 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 E2F1Q01094 437 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 DCUN1D3Q8IWE4 304 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 OR10G6Q8NH81 332 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 MAGEC3Q8TD91 643 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 EPS8L3Q8TE67 593 aaKnown RBP21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 ANKRD49Q8WVL7 239 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 LCN9Q8WX39 176 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 ASB11Q8WXH4 323 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 ZMYND15Q9H091 742 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 TOR4AQ9NXH8 423 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 CIDEBQ9UHD4 219 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 ACOT9Q9Y305 439 aa21.52■■□□□ 1.04
CHMP2A-204ENST00000597848 PCNX2A6NKB5 2137 aa21.52■■□□□ 1.03
CHMP2A-204ENST00000597848 LILRA5A6NI73 299 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 ZBTB14O43829 449 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 KDM1AO60341 852 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 PSIP1O75475 530 aaKnown RBP21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 C1orf105O95561 183 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 TSPAN12O95859 305 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 CCDC166P0CW27 439 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 MAP4P27816 1152 aaKnown RBP21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 EPHA4P54764 986 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 NR1D2Q14995 579 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 TAF1BQ53T94 588 aaPredicted RBP21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 NKAIN2Q5VXU1 208 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 USP53Q70EK8 1073 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 UBE2R2Q712K3 238 aaPredicted RBP21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 SPATA6LQ8N4H0 392 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 OR4E2Q8NGC2 313 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 OR52E1Q8NGJ3 308 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 RAD51AP1Q96B01 352 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 MTBPQ96DY7 904 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 PDLIM5Q96HC4 596 aaKnown RBP21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 LRRN3Q9H3W5 708 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 CTNNAL1Q9UBT7 734 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 PLAGL1Q9UM63 463 aa21.51■■□□□ 1.03
CHMP2A-204ENST00000597848 IGHV1OR21-1A0A087WYE8 117 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 A0A096LPK6 155 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 ARHGEF33A8MVX0 844 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 RASGRF2O14827 1237 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 OPA1O60313 960 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 TCEA3O75764 348 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 UBXN7O94888 489 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 ALDOAP04075 364 aaKnown RBP21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 C2P06681 752 aa21.5■■□□□ 1.03
CHMP2A-204ENST00000597848 C8GP07360 202 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms