RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 KIR3DX1Q9H7L2 352 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 POT1Q9NUX5 634 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 IMP3Q9NV31 184 aaKnown RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 TAS2R13Q9NYV9 303 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 NCKIPSDQ9NZQ3 722 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 TMEM9Q9P0T7 183 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 PDP2Q9P2J9 529 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 FETUBQ9UGM5 382 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 ZNF180Q9UJW8 692 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 SLC39A10Q9ULF5 831 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 GOLGA4Q13439 2230 aaKnown RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 LILRA5A6NI73 299 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 ARHGEF33A8MVX0 844 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 E5RI56 91 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 POC1B-GALNT4F8VUJ3 575 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 EIF3FO00303 357 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 BTN3A3O00478 584 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 VPS26AO75436 327 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 RFPL1O75677 317 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 NUDT17P0C025 328 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 SLC35G4P0C7Q5 338 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 CBSLP0DN79 551 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 PEBP1P30086 187 aaKnown RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 SPRP35270 261 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 CBSP35520 551 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 RPIAP49247 311 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 DUSP3P51452 185 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 PPP1CAP62136 330 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 DAB2P98082 770 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 PRKG2Q13237 762 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 ILKQ13418 452 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 PPP1R3AQ16821 1122 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 BEND6Q5SZJ8 279 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 MROH9Q5TGP6 573 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 DHRS13Q6UX07 377 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 RAB44Q7Z6P3 723 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 TBC1D21Q8IYX1 336 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 ADGRF3Q8IZF5 1079 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 CENPLQ8N0S6 344 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 SPATA6LQ8N4H0 392 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 TMEM151AQ8N4L1 468 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 Q8N9G6 341 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 FBXO15Q8NCQ5 510 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 OR6C4Q8NGE1 309 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 OR52E1Q8NGJ3 308 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 ADAMTS14Q8WXS8 1223 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 RSC1A1Q92681 617 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 FERD3LQ96RJ6 166 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 NUDT22Q9BRQ3 303 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 TSSK1BQ9BXA7 367 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 LRRN3Q9H3W5 708 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 TFB2MQ9H5Q4 396 aaKnown RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 MVB12BQ9H7P6 319 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 POPDC3Q9HBV1 291 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 CTNNAL1Q9UBT7 734 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 CIDEBQ9UHD4 219 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 ATXN7L1Q9ULK2 861 aaPredicted RBP10.28□□□□□ -0.76
LIG1-210ENST00000596332 ICKQ9UPZ9 632 aa10.28□□□□□ -0.76
LIG1-210ENST00000596332 A0A1W2PPV9 198 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 RFPL3O75679 317 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 VIPP01282 170 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 C9P02748 559 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 C2P06681 752 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 ERGP11308 486 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 SLC2A4P14672 509 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 ALDH4A1P30038 563 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 HALP42357 657 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 BDKRB1P46663 353 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 ID4P47928 161 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 LSSP48449 732 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 EPHA4P54764 986 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 IRF9Q00978 393 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 ZFP36L1Q07352 338 aaKnown RBP10.27□□□□□ -0.77
LIG1-210ENST00000596332 USP10Q14694 798 aaKnown RBP10.27□□□□□ -0.77
LIG1-210ENST00000596332 RASA2Q15283 850 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 PHKG1Q16816 387 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 SBSNQ6UWP8 590 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 UNC5DQ6UXZ4 953 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 TIFABQ6ZNK6 161 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 USP53Q70EK8 1073 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 B3GNT8Q7Z7M8 397 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 TDRPQ86YL5 185 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 SLITRK4Q8IW52 837 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 RBM12BQ8IXT5 1001 aaKnown RBP10.27□□□□□ -0.77
LIG1-210ENST00000596332 PLD6Q8N2A8 252 aaKnown RBP10.27□□□□□ -0.77
LIG1-210ENST00000596332 MYRIPQ8NFW9 859 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 GABPB2Q8TAK5 448 aaPredicted RBP10.27□□□□□ -0.77
LIG1-210ENST00000596332 NAT6Q93015 286 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 CXorf40BQ96DE9 158 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 LINGO1Q96FE5 620 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 PPM1MQ96MI6 270 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 IL17FQ96PD4 163 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 RAB33BQ9H082 229 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 CCDC68Q9H2F9 335 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 XKR8Q9H6D3 395 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 SNX15Q9NRS6 342 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 IGSF5Q9NSI5 407 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 SEMA5BQ9P283 1151 aa10.27□□□□□ -0.77
LIG1-210ENST00000596332 TRMT6Q9UJA5 497 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms