RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 RNF10Q8N5U6 811 aaKnown RBP14.31□□□□□ -0.12
PNKP-202ENST00000593706 LILRA3Q8N6C8 439 aaPredicted RBP14.31□□□□□ -0.12
PNKP-202ENST00000593706 ACVR1CQ8NER5 493 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 FDCSPQ8NFU4 85 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 SPATA13Q96N96 652 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 CCM2Q9BSQ5 444 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 NUDT9Q9BW91 350 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 SYTL2Q9HCH5 934 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 CASS4Q9NQ75 786 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 CUEDC1Q9NWM3 386 aaPredicted RBP14.31□□□□□ -0.12
PNKP-202ENST00000593706 PADI2Q9Y2J8 665 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 R3HDM2Q9Y2K5 976 aaKnown RBP14.31□□□□□ -0.12
PNKP-202ENST00000593706 CNTRLQ7Z7A1 2325 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 CFAP99D6REC4 459 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 IFRD1O00458 451 aaPredicted RBP14.3□□□□□ -0.12
PNKP-202ENST00000593706 ITGALP20701 1170 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 PSMB4P28070 264 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 RORAP35398 523 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 LMAN1P49257 510 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 PRLHRP49683 370 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 ITGA1P56199 1179 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 MRPL49Q13405 166 aaKnown RBP14.3□□□□□ -0.12
PNKP-202ENST00000593706 OLIG2Q13516 323 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 RAPSNQ13702 412 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 ATP1A4Q13733 1029 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 NCF4Q15080 339 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 KYNUQ16719 465 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 CCDC181Q5TID7 509 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 SLC6A19Q695T7 634 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 ITPRIPL1Q6GPH6 555 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 UBL4BQ8N7F7 174 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 TMEM102Q8N9M5 508 aaPredicted RBP14.3□□□□□ -0.12
PNKP-202ENST00000593706 OR1L3Q8NH93 324 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 SLC35B2Q8TB61 432 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 CCDC110Q8TBZ0 833 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 N4BP2L2Q92802 583 aaPredicted RBP14.3□□□□□ -0.12
PNKP-202ENST00000593706 ULK4Q96C45 1275 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 SGSM3Q96HU1 749 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 LINC00615Q96LM1 132 aaPredicted RBP14.3□□□□□ -0.12
PNKP-202ENST00000593706 FERD3LQ96RJ6 166 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 APOL2Q9BQE5 337 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 VPS37BQ9H9H4 285 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 PCMTD2Q9NV79 361 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 SERTAD3Q9UJW9 196 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 ZGRF1Q86YA3 2104 aa14.3□□□□□ -0.12
PNKP-202ENST00000593706 C5orf60A6NFR6 353 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 TCP11X1B4DZS4 312 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 E7EQ34 232 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 BTN3A1O00481 513 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 KCNN4O15554 427 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 CRTAMO95727 393 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 ST6GAL1P15907 406 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 AGXTP21549 392 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 VARSP26640 1264 aaKnown RBP14.29□□□□□ -0.12
PNKP-202ENST00000593706 PRDX3P30048 256 aaKnown RBP14.29□□□□□ -0.12
PNKP-202ENST00000593706 OTX2P32243 289 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 EIF2S3LQ2VIR3 472 aaKnown RBP14.29□□□□□ -0.12
PNKP-202ENST00000593706 DENND5AQ6IQ26 1287 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 ZNF449Q6P9G9 518 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 DARS2Q6PI48 645 aaKnown RBP14.29□□□□□ -0.12
PNKP-202ENST00000593706 ZNF662Q6ZS27 426 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 HOOK3Q86VS8 718 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 GPR135Q8IZ08 494 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 NXPE1Q8N323 547 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 Q8NA96 180 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 OR13C4Q8NGS5 318 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 PRR7Q8TB68 274 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 PNPLA2Q96AD5 504 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 COPS8Q99627 209 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 DPH2Q9BQC3 489 aaPredicted RBP14.29□□□□□ -0.12
PNKP-202ENST00000593706 HGH1Q9BTY7 390 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 TSGA10Q9BZW7 698 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 KLHL25Q9H0H3 589 aa14.29□□□□□ -0.12
PNKP-202ENST00000593706 C2orf74A8MZ97 194 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 SGTAO43765 313 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 ZNF189O75820 626 aaPredicted RBP14.28□□□□□ -0.12
PNKP-202ENST00000593706 STK10O94804 968 aaKnown RBP14.28□□□□□ -0.12
PNKP-202ENST00000593706 HBQ1P09105 142 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 MSL3P1P0C860 447 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 RNF224P0DH78 156 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 ATP1B2P14415 290 aaPredicted RBP14.28□□□□□ -0.12
PNKP-202ENST00000593706 PVRP15151 417 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 CETN2P41208 172 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 GDF10P55107 478 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 CCZ1BP86790 482 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 CCZ1P86791 482 aaPredicted RBP14.28□□□□□ -0.12
PNKP-202ENST00000593706 TMPRSS15P98073 1019 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 PRPSAP1Q14558 356 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 ZNF789Q5FWF6 425 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 KCTD11Q693B1 232 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 ZBTB2Q8N680 514 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 OR52E1Q8NGJ3 308 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 HEXDCQ8WVB3 486 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 PITPNM3Q9BZ71 974 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 FAM96AQ9H5X1 160 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 COG4Q9H9E3 785 aa14.28□□□□□ -0.12
PNKP-202ENST00000593706 ARNT2Q9HBZ2 717 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms