RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 BOP1Q14137 746 aaKnown RBP15.83■□□□□ 0.12
LIG1-205ENST00000593425 DEFB110Q30KQ9 67 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 CCDC181Q5TID7 509 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 SARM1Q6SZW1 724 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 TRIM73Q86UV7 250 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 SERPINA9Q86WD7 417 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 AMIGO1Q86WK6 493 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 RAB43Q86YS6 212 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 HPS6Q86YV9 775 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 CNGA4Q8IV77 575 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 CDKL3Q8IVW4 592 aaPredicted RBP15.83■□□□□ 0.12
LIG1-205ENST00000593425 CCDC110Q8TBZ0 833 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 HEXDCQ8WVB3 486 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 C19orf60Q96EN9 201 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 TBL1YQ9BQ87 522 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 MVB12BQ9H7P6 319 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 CUEDC1Q9NWM3 386 aaPredicted RBP15.83■□□□□ 0.12
LIG1-205ENST00000593425 G3BP2Q9UN86 482 aaKnown RBP15.83■□□□□ 0.12
LIG1-205ENST00000593425 ICKQ9UPZ9 632 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.83■□□□□ 0.12
LIG1-205ENST00000593425 ESPL1Q14674 2120 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 PIKFYVEQ9Y2I7 2098 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 AKR1B15C9JRZ8 316 aaPredicted RBP15.82■□□□□ 0.12
LIG1-205ENST00000593425 H3BMH7 237 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 PJA2O43164 708 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 KRT86O43790 486 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 RBP3P10745 1247 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 GABRA4P48169 554 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 EIF3EP60228 445 aaKnown RBP15.82■□□□□ 0.12
LIG1-205ENST00000593425 TBX2Q13207 712 aaPredicted RBP15.82■□□□□ 0.12
LIG1-205ENST00000593425 PRPSAP1Q14558 356 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 GPR33Q49SQ1 333 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 ZRANB3Q5FWF4 1079 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 SPESP1Q6UW49 350 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 MRGPREQ86SM8 312 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 TMEM151BQ8IW70 566 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 CLDN19Q8N6F1 224 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 C19orf47Q8N9M1 422 aaKnown RBP15.82■□□□□ 0.12
LIG1-205ENST00000593425 PRR7Q8TB68 274 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 TFGQ92734 400 aaPredicted RBP15.82■□□□□ 0.12
LIG1-205ENST00000593425 SGSM3Q96HU1 749 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 SPATA13Q96N96 652 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 C19orf43Q9BQ61 176 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 DPH2Q9BQC3 489 aaPredicted RBP15.82■□□□□ 0.12
LIG1-205ENST00000593425 SLC29A3Q9BZD2 475 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 ARNT2Q9HBZ2 717 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 PADI2Q9Y2J8 665 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 NUP210LQ5VU65 1888 aa15.82■□□□□ 0.12
LIG1-205ENST00000593425 SPTAN1Q13813 2472 aaKnown RBP15.82■□□□□ 0.12
LIG1-205ENST00000593425 MASP2O00187 686 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 MAP3K7O43318 606 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 CTSBP07858 339 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 HBQ1P09105 142 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 UGT2B7P16662 529 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 AGXTP21549 392 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 CTNNA1P35221 906 aaKnown RBP15.81■□□□□ 0.12
LIG1-205ENST00000593425 FOXL2P58012 376 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 RPA4Q13156 261 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 ZIC1Q15915 447 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 KYNUQ16719 465 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 VWA5B1Q5TIE3 1220 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 C1orf189Q5VU69 101 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 MLIPQ5VWP3 458 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 DARS2Q6PI48 645 aaKnown RBP15.81■□□□□ 0.12
LIG1-205ENST00000593425 KLHDC8BQ8IXV7 354 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 OR5AR1Q8NGP9 310 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 SNRNP40Q96DI7 357 aaKnown RBP15.81■□□□□ 0.12
LIG1-205ENST00000593425 DHRS4Q9BTZ2 278 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 SPRTNQ9H040 489 aaPredicted RBP15.81■□□□□ 0.12
LIG1-205ENST00000593425 VPS37BQ9H9H4 285 aa15.81■□□□□ 0.12
LIG1-205ENST00000593425 H7C0S8 307 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 CNOT3O75175 753 aaKnown RBP15.8■□□□□ 0.12
LIG1-205ENST00000593425 TPBGLP0DKB5 382 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 COPS2P61201 443 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 NR6A1Q15406 480 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 DBN1Q16643 649 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 PLEKHN1Q494U1 663 aaPredicted RBP15.8■□□□□ 0.12
LIG1-205ENST00000593425 AADACL2Q6P093 401 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 UNC5AQ6ZN44 842 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 TAS2R42Q7RTR8 314 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 PIANPQ8IYJ0 282 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 GPR135Q8IZ08 494 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 TC2NQ8N9U0 490 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 FLVCR1-AS1Q8TAF5 88 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 TCTN2Q96GX1 697 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 GBP5Q96PP8 586 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 OR2A14Q96R47 310 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 FERMT1Q9BQL6 677 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 OSBPL8Q9BZF1 889 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 ASF1BQ9NVP2 202 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 NLE1Q9NVX2 485 aaPredicted RBP15.8■□□□□ 0.12
LIG1-205ENST00000593425 SPHK1Q9NYA1 384 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 C5AR2Q9P296 337 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 ERRFI1Q9UJM3 462 aaPredicted RBP15.8■□□□□ 0.12
LIG1-205ENST00000593425 PTRH2Q9Y3E5 179 aaKnown RBP15.8■□□□□ 0.12
LIG1-205ENST00000593425 PCDHA3Q9Y5H8 950 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 PCDHA13Q9Y5I0 950 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 PRSS21Q9Y6M0 314 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 SNRNP200O75643 2136 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms