RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 E7EVH7 732 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 MATN2O00339 956 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 QSOX1O00391 747 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 IFRD1O00458 451 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-213ENST00000593254 SEMA7AO75326 666 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 VPS4BO75351 444 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 TIAF1O95411 115 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 ZBTB11O95625 1053 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-213ENST00000593254 GAS8O95995 478 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CCDC175P0C221 793 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 EBLN1P0CF75 366 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 ETS1P14921 441 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-213ENST00000593254 F8A1P23610 371 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 PREPP48147 710 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 HSD11B2P80365 405 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 ACVR1Q04771 509 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 SNX1Q13596 522 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 LAMB3Q13751 1172 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 KRT33BQ14525 404 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CCNG2Q16589 344 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 TSTD2Q5T7W7 516 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 ARMC6Q6NXE6 501 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 DRICH1Q6PGQ1 229 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-213ENST00000593254 PPP1R21Q6ZMI0 780 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 PRUNE1Q86TP1 453 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CCDC89Q8N998 374 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 OR4E2Q8NGC2 313 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 MVB12BQ9H7P6 319 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 LZTFL1Q9NQ48 299 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CASS4Q9NQ75 786 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 RAB6BQ9NRW1 208 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 FGF21Q9NSA1 209 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 SMARCAL1Q9NZC9 954 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 PAK5Q9P286 719 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 SLC2A6Q9UGQ3 507 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CROTQ9UKG9 612 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 POMT2Q9UKY4 750 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 VPS4AQ9UN37 437 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 BTRCQ9Y297 605 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 MRPS18BQ9Y676 258 aaKnown RBP12.82□□□□□ -0.36
H3F3B-213ENST00000593254 PRSS21Q9Y6M0 314 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 FER1L5A0AVI2 2057 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CELSR1Q9NYQ6 3014 aa12.82□□□□□ -0.36
H3F3B-213ENST00000593254 CSMD2Q7Z408 3487 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 MKRN2OSH3BPM6 223 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 LIN7AO14910 233 aaPredicted RBP12.81□□□□□ -0.36
H3F3B-213ENST00000593254 MT-ND3P03897 115 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 APRTP07741 180 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 ADRA1DP25100 572 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 DLSTP36957 453 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 ARCN1P48444 511 aaKnown RBP12.81□□□□□ -0.36
H3F3B-213ENST00000593254 LMAN1P49257 510 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 ARL4DP49703 201 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 TUBB4BP68371 445 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 PRKAA1Q13131 559 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 TUBB2AQ13885 445 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 BOP1Q14137 746 aaKnown RBP12.81□□□□□ -0.36
H3F3B-213ENST00000593254 C16orf46Q6P387 395 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 ZNF449Q6P9G9 518 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 AFTPHQ6ULP2 937 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 LRRC8AQ8IWT6 810 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 OR52E1Q8NGJ3 308 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 LCN9Q8WX39 176 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 TFGQ92734 400 aaPredicted RBP12.81□□□□□ -0.36
H3F3B-213ENST00000593254 PEX13Q92968 403 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 HDAC10Q969S8 669 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.81□□□□□ -0.36
H3F3B-213ENST00000593254 PPM1MQ96MI6 270 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 ZNF778Q96MU6 729 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 FERD3LQ96RJ6 166 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 TUBB2BQ9BVA1 445 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 SRMSQ9H3Y6 488 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 TFB2MQ9H5Q4 396 aaKnown RBP12.81□□□□□ -0.36
H3F3B-213ENST00000593254 C1GALT1Q9NS00 363 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 PADI1Q9ULC6 663 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 DRG1Q9Y295 367 aaKnown RBP12.81□□□□□ -0.36
H3F3B-213ENST00000593254 PCDHGA6Q9Y5G7 932 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 AKAP9Q99996 3911 aa12.81□□□□□ -0.36
H3F3B-213ENST00000593254 ADGRG4Q8IZF6 3080 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 BTN3A3O00478 584 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 BTN3A1O00481 513 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 SNPHO15079 494 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 GOT2P00505 430 aaKnown RBP12.8□□□□□ -0.36
H3F3B-213ENST00000593254 FTH1P02794 183 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 CCNYL3P0C7X3 344 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 ZSCAN5DPP0CG00 497 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 CDH3P22223 829 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
H3F3B-213ENST00000593254 CCZ1BP86790 482 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 CCZ1P86791 482 aaPredicted RBP12.8□□□□□ -0.36
H3F3B-213ENST00000593254 ZNF787Q6DD87 383 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 FBXO38Q6PIJ6 1188 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 ZNF534Q76KX8 674 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 NLRP9Q7RTR0 991 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 TICAM1Q8IUC6 712 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 PHC3Q8NDX5 983 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms