RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GPS1Q13098 491 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 RPA4Q13156 261 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 PAPD7Q5XG87 772 aaKnown RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 PRSS42Q7Z5A4 293 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 PDZD3Q86UT5 571 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 CAND1Q86VP6 1230 aaKnown RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 DTX1Q86Y01 620 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 JAMLQ86YT9 394 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 PLXDC1Q8IUK5 500 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 OR4L1Q8NH43 312 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 ZFPM2Q8WW38 1151 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 CPT1BQ92523 772 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 C9orf72Q96LT7 481 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 C12orf66Q96MD2 445 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 DDA1Q9BW61 102 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 RAB33BQ9H082 229 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 ZMYND15Q9H091 742 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 PRORYQ9H606 182 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 VPS37BQ9H9H4 285 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 IMP3Q9NV31 184 aaKnown RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 SYBUQ9NX95 663 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 SIDT1Q9NXL6 827 aaKnown RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 BFARQ9NZS9 450 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 MARCH4Q9P2E8 410 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 FAM8A1Q9UBU6 413 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 EPHA6Q9UF33 1036 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 SLC24A2Q9UI40 661 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 RALYQ9UKM9 306 aaKnown RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 ATRXP46100 2492 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 A8MU76 341 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 QSOX1O00391 747 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 TOX3O15405 576 aaPredicted RBP10.92□□□□□ -0.66
SMAD4-211ENST00000590499 KLK10O43240 276 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 POLBP06746 335 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 LIPCP11150 499 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 AMD1P17707 334 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 NMBRP28336 390 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 PDHA2P29803 388 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 MAGEA3P43357 314 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 PREPP48147 710 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 CD151P48509 253 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 PSMA6P60900 246 aaKnown RBP10.92□□□□□ -0.66
SMAD4-211ENST00000590499 PPP1CAP62136 330 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 PRAMEP78395 509 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 MC2RQ01718 297 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 SNAP47Q5SQN1 464 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 LYPLAL1Q5VWZ2 237 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 ARMC3Q5W041 872 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 CERS6Q6ZMG9 384 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 MCUQ8NE86 351 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 OR6P1Q8NGX9 317 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 JPH3Q8WXH2 748 aaPredicted RBP10.92□□□□□ -0.66
SMAD4-211ENST00000590499 ART4Q93070 314 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMAD4-211ENST00000590499 TGM7Q96PF1 710 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 TAAR9Q96RI9 348 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 ZNF768Q9H5H4 540 aaKnown RBP10.92□□□□□ -0.66
SMAD4-211ENST00000590499 KIR3DX1Q9H7L2 352 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 NEUROD4Q9HD90 331 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 NOP53Q9NZM5 478 aaKnown RBP10.92□□□□□ -0.66
SMAD4-211ENST00000590499 SEMA5BQ9P283 1151 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 KLHL3Q9UH77 587 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 SOX13Q9UN79 622 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 B3GALT1Q9Y5Z6 326 aa10.92□□□□□ -0.66
SMAD4-211ENST00000590499 SNRNP200O75643 2136 aaKnown RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 GOLGA6L10A0A0M3HER8 536 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 SLC5A10A0PJK1 596 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 OR5K3A6NET4 321 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 EFCAB7A8K855 629 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 LIN7AO14910 233 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 EFSO43281 561 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 KIF1CO43896 1103 aaKnown RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 AVILO75366 819 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 FTH1P02794 183 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 MLNP12872 115 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 CD82P27701 267 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 PPM1FP49593 454 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 GNG11P61952 73 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 TGIF1Q15583 401 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 FASTKD1Q53R41 847 aaKnown RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 LDB1Q86U70 411 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 ZFAND4Q86XD8 727 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 FAM129CQ86XR2 697 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 CREG2Q8IUH2 290 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 AGGF1Q8N302 714 aaeCLIP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 NAT8LQ8N9F0 302 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 LKAAEAR1Q8TD35 194 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 GRK7Q8WTQ7 553 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 SNRNP27Q8WVK2 155 aaKnown RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 KLHL6Q8WZ60 621 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 SLCO2A1Q92959 643 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 MFSD3Q96ES6 412 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 SERPINB12Q96P63 405 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 SPRY4Q9C004 299 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
SMAD4-211ENST00000590499 FBXO8Q9NRD0 319 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 CATSPERZQ9NTU4 200 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 SLC39A1Q9NY26 324 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 HEBP2Q9Y5Z4 205 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms