RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CTAGE9A4FU28 777 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 SLC9B1P1A6NJY1 282 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 MATN2O00339 956 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 BTN3A1O00481 513 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 ATXN7O15265 892 aaPredicted RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 SPAG6O75602 509 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 KIAA0754O94854 1291 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 ZBTB11O95625 1053 aaPredicted RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 CCNYL3P0C7X3 344 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 EBLN1P0CF75 366 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 FGF5P12034 268 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 LIFP15018 202 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 ZNF28P17035 718 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 PRDX3P30048 256 aaKnown RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 PAFAH1B1P43034 410 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 CYP4F2P78329 520 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 TUBB3Q13509 450 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 THOC5Q13769 683 aaKnown RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 TMED2Q15363 201 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 ANKRD20A4Q4UJ75 823 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 PAPD7Q5XG87 772 aaKnown RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 NEPROQ6NW34 567 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 C6orf15Q6UXA7 325 aaPredicted RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 LRRC6Q86X45 466 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 KLHL7Q8IXQ5 586 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 PPIL6Q8IXY8 311 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 TBC1D21Q8IYX1 336 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 UNC5BQ8IZJ1 945 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 GALNT6Q8NCL4 622 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 LKAAEAR1Q8TD35 194 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 SKA2Q8WVK7 121 aaPredicted RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 ZNF669Q96BR6 464 aaPredicted RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 SERPINB12Q96P63 405 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 PANX3Q96QZ0 392 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 TCF12Q99081 682 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 TRIM56Q9BRZ2 755 aaKnown RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 GPN2Q9H9Y4 310 aaPredicted RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 FGF21Q9NSA1 209 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 LNPEPQ9UIQ6 1025 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 PLAGL1Q9UM63 463 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 CRYL1Q9Y2S2 319 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 TMEM184BQ9Y519 407 aaPredicted RBP11.73□□□□□ -0.53
TPM4-212ENST00000590180 PCDHGA4Q9Y5G9 962 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 RPS6KL1Q9Y6S9 549 aa11.73□□□□□ -0.53
TPM4-212ENST00000590180 ZFHX4Q86UP3 3567 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 LOC101059948A0A1B0GTJ6 334 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 C2orf74A8MZ97 194 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 ERVH48-1M5A8F1 160 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 KPNA5O15131 536 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 KDM1AO60341 852 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 GPC4O75487 556 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 WT1P19544 449 aaPredicted RBP11.72□□□□□ -0.53
TPM4-212ENST00000590180 CHRM3P20309 590 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 RPS3P23396 243 aaKnown RBP eCLIP11.72□□□□□ -0.53
TPM4-212ENST00000590180 ARNTP27540 789 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 AOAHP28039 575 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 SHMT2P34897 504 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.72□□□□□ -0.53
TPM4-212ENST00000590180 DNAJC21Q5F1R6 531 aaKnown RBP11.72□□□□□ -0.53
TPM4-212ENST00000590180 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 KIAA0930Q6ICG6 404 aaPredicted RBP11.72□□□□□ -0.53
TPM4-212ENST00000590180 TTC23LQ6PF05 361 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 UNC5AQ6ZN44 842 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 OTOAQ7RTW8 1153 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 PCGF5Q86SE9 256 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 BPHLQ86WA6 291 aaPredicted RBP11.72□□□□□ -0.53
TPM4-212ENST00000590180 VRK3Q8IV63 474 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 SLC22A15Q8IZD6 547 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 D2HGDHQ8N465 521 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 ESX1Q8N693 406 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 NAT8LQ8N9F0 302 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 OR5K2Q8NHB8 316 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 ARHGAP9Q9BRR9 750 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 EFHD1Q9BUP0 239 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 KLHL25Q9H0H3 589 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 P2RY12Q9H244 342 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 C1GALT1Q9NS00 363 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 KCND1Q9NSA2 647 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 ACTR10Q9NZ32 417 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 IL1RAPL1Q9NZN1 696 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 POMT2Q9UKY4 750 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 ICKQ9UPZ9 632 aa11.72□□□□□ -0.53
TPM4-212ENST00000590180 ATRXP46100 2492 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 NBEAQ8NFP9 2946 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 PIPSLA2A3N6 862 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 ISM1B1AKI9 464 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 DNALI1O14645 258 aaPredicted RBP11.71□□□□□ -0.53
TPM4-212ENST00000590180 DLGAP3O95886 979 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 NTRK1P04629 796 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 RPN2P04844 631 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 PTGIRP43119 386 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 TUBB4BP68371 445 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 ABHD18Q0P651 414 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 PTK6Q13882 451 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 TUBB2AQ13885 445 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 GPR19Q15760 415 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 RNF187Q5TA31 235 aaPredicted RBP11.71□□□□□ -0.53
TPM4-212ENST00000590180 PWWP2BQ6NUJ5 590 aa11.71□□□□□ -0.53
TPM4-212ENST00000590180 CREG2Q8IUH2 290 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms