RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 TRIM48Q8IWZ4 208 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 SLC35F3Q8IY50 421 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 FBXO15Q8NCQ5 510 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 OR5K2Q8NHB8 316 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 MAGEC3Q8TD91 643 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 SLC37A2Q8TED4 501 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 ANKRD49Q8WVL7 239 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PGM2Q96G03 612 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 APOLD1Q96LR9 279 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 FERD3LQ96RJ6 166 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 TRIT1Q9H3H1 467 aaKnown RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 NMRAL1Q9HBL8 299 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 POT1Q9NUX5 634 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 IMP3Q9NV31 184 aaKnown RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 SIRPGQ9P1W8 387 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 CTNNAL1Q9UBT7 734 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PADI4Q9UM07 663 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 ASF1AQ9Y294 204 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 BTBD3Q9Y2F9 522 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 TP53BP1Q12888 1972 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 ARHGEF17Q96PE2 2063 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 RGS16O15492 202 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-218ENST00000589294 ZW10O43264 779 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 SH3BP5O60239 455 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 KDM1AO60341 852 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 CBFA2T3O75081 653 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 KLHL2O95198 593 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 C1orf105O95561 183 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 CATP04040 527 aaKnown RBP11.86□□□□□ -0.51
DNMT1-218ENST00000589294 LTA4HP09960 611 aaKnown RBP11.86□□□□□ -0.51
DNMT1-218ENST00000589294 CKMT2P17540 419 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 GPR3P46089 330 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 HHEXQ03014 270 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 BIRC2Q13490 618 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 ACAP2Q15057 778 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 SH2D5Q6ZV89 423 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 PIWIL4Q7Z3Z4 852 aaKnown RBP11.86□□□□□ -0.51
DNMT1-218ENST00000589294 KIAA2013Q8IYS2 634 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 KYQ8NBH2 561 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 PHC3Q8NDX5 983 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 CFAP61Q8NHU2 1237 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 MCOLN3Q8TDD5 553 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 NETO1Q8TDF5 533 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 PATE1Q8WXA2 126 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 RUFY1Q96T51 708 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 SLC12A9Q9BXP2 914 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 TRIM54Q9BYV2 358 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 VPS11Q9H270 941 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 PARVBQ9HBI1 364 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 SENP1Q9P0U3 644 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 LRIT1Q9P2V4 623 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 DCDC2Q9UHG0 476 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 NOVA2Q9UNW9 492 aaKnown RBP11.86□□□□□ -0.51
DNMT1-218ENST00000589294 RUVBL2Q9Y230 463 aaKnown RBP11.86□□□□□ -0.51
DNMT1-218ENST00000589294 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
DNMT1-218ENST00000589294 ZFC3H1O60293 1989 aaKnown RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 A0A1W2PPM1 405 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 EME2A4GXA9 379 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 RHPN2P1A8MT19 583 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 MAP2K7O14733 419 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 PPM1DO15297 605 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 GSTA1P08263 222 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 ENO2P09104 434 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 MYZAPP0CAP1 466 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 PYGBP11216 843 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CD1DP15813 335 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 SDHBP21912 280 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 MAP4P27816 1152 aaKnown RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CCT5P48643 541 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 MAZP56270 477 aaKnown RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 SP140Q13342 867 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CSHL1Q14406 222 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 TSNAXIP1Q2TAA8 658 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 TNFAIP8L3Q5GJ75 292 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 KLC3Q6P597 504 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 UBE2R2Q712K3 238 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 ZNF438Q7Z4V0 828 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 TRABD2AQ86V40 505 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 DCUN1D3Q8IWE4 304 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 SFTPA2Q8IWL1 248 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CENPLQ8N0S6 344 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 OR5AR1Q8NGP9 310 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 BAHD1Q8TBE0 780 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 STAG3L4Q8TBR4 150 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 NAT6Q93015 286 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 KIAA1191Q96A73 305 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 RAD51AP1Q96B01 352 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CNDP2Q96KP4 475 aaKnown RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 TSNARE1Q96NA8 513 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CAMK1GQ96NX5 476 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 STMN4Q9H169 189 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 TFB2MQ9H5Q4 396 aaKnown RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 KIR3DX1Q9H7L2 352 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 IGSF5Q9NSI5 407 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 FTSJ1Q9UET6 329 aa11.85□□□□□ -0.51
DNMT1-218ENST00000589294 CFAP20Q9Y6A4 193 aaKnown RBP11.85□□□□□ -0.51
DNMT1-218ENST00000589294 ASCC3Q8N3C0 2202 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms