RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 IPPKQ9H8X2 491 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 PARVBQ9HBI1 364 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CD248Q9HCU0 757 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CD320Q9NPF0 282 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 PFDN4Q9NQP4 134 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 RIC8BQ9NVN3 520 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ARL15Q9NXU5 204 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF225Q9UK10 706 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 PDE10AQ9Y233 779 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 A0A088AWK7 358 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 K7ESM1 405 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 ARNTLO00327 626 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 NR5A2O00482 541 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 MID1O15344 667 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 RNASEH1O60930 286 aaKnown RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 STK16O75716 305 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 SOD1P00441 154 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 CAPN1P07384 714 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 HIST1H2AGP0C0S8 130 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 HGFP14210 728 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 HIST1H2ADP20671 130 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 GPX3P22352 226 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 GDF5P43026 501 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 TNFRSF4P43489 277 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 PREPP48147 710 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 PIK3CGP48736 1102 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 RPIAP49247 311 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 PRLHRP49683 370 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 GALK1P51570 392 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 CTSCP53634 463 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 CDKL1Q00532 357 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 TMEM115Q12893 351 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 TRAF3Q13114 568 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 HTR4Q13639 388 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 GTF2H3Q13889 308 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 E2F5Q15329 346 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 TRMT5Q32P41 509 aaKnown RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 XKR7Q5GH72 579 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 CDKL4Q5MAI5 379 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 PIP5KL1Q5T9C9 394 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 C1orf146Q5VVC0 180 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 REP15Q6BDI9 236 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 METTL2BQ6P1Q9 378 aaKnown RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 TMEM220Q6QAJ8 160 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 RIPOR1Q6ZS17 1223 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 SPATA19Q7Z5L4 167 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 MILR1Q7Z6M3 343 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 DSELQ8IZU8 1212 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 MIER2Q8N344 545 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 CFAP61Q8NHU2 1237 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 HMGCLL1Q8TB92 370 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 METTL6Q8TCB7 284 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 MAGEC3Q8TD91 643 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 WDR60Q8WVS4 1066 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 ASZ1Q8WWH4 475 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 ASB11Q8WXH4 323 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 GLMNQ92990 594 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 RAB7BQ96AH8 199 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 HIST1H2AHQ96KK5 128 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 NPAS2Q99743 824 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 HIST1H2AJQ99878 128 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 P2RY13Q9BPV8 354 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 H2AFJQ9BTM1 129 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 SLC12A9Q9BXP2 914 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 MRPL1Q9BYD6 325 aaKnown RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 RSPH9Q9H1X1 276 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 OR2AG1Q9H205 316 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 EFCAB1Q9HAE3 211 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 RNPEPL1Q9HAU8 725 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 NDE1Q9NXR1 346 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 EPS15L1Q9UBC2 864 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 SLC7A8Q9UHI5 535 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 CNOT6Q9ULM6 557 aaKnown RBP8.57□□□□□ -1.04
SMAD4-206ENST00000588860 FADS3Q9Y5Q0 445 aa8.57□□□□□ -1.04
SMAD4-206ENST00000588860 REV3LO60673 3130 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 TMEM202A6NGA9 273 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 H0Y3Z8 333 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 CHUKO15111 745 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 CFLARO15519 480 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 SYNCRIPO60506 623 aaKnown RBP8.56□□□□□ -1.04
SMAD4-206ENST00000588860 KRT36O76013 467 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 SLCO2B1O94956 709 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 WDR47O94967 919 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 PSMG1O95456 288 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 ADH1BP00325 375 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 PCCBP05166 539 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 SNRPB2P08579 225 aaKnown RBP8.56□□□□□ -1.04
SMAD4-206ENST00000588860 GSTM1P09488 218 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 PRR35P0CG20 571 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 EPB42P16452 691 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 MAP4P27816 1152 aaKnown RBP8.56□□□□□ -1.04
SMAD4-206ENST00000588860 BDKRB1P46663 353 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 HTR6P50406 440 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 GSTM4Q03013 218 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 DPTQ07507 201 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 ABRQ12979 859 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 STX5Q13190 355 aa8.56□□□□□ -1.04
SMAD4-206ENST00000588860 CAMK2GQ13555 558 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-206ENST00000588860 RPS6KA2Q15349 733 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms