RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PDGFBP01127 241 aaPredicted RBP25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 CATP04040 527 aaKnown RBP25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 ACP5P13686 325 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 SIGLEC14Q08ET2 396 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 MAMSTRQ6ZN01 415 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 PDZD3Q86UT5 571 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 FBXO15Q8NCQ5 510 aaPredicted RBP25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 SPDYE1Q8NFV5 336 aaPredicted RBP25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 MAPK15Q8TD08 544 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 AGAP11Q8TF27 550 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 OR1E3Q8WZA6 343 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 WDR92Q96MX6 357 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 UHRF1Q96T88 793 aaPredicted RBP25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 ZDHHC5Q9C0B5 715 aa25.4■■□□□ 1.66
SCAMP4-210ENST00000588555 A0A1W2PPC4 97 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 TOR1BO14657 336 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 HDAC3O15379 428 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 C1orf105O95561 183 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 KELP23276 732 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 BDKRB1P46663 353 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 HNMTP50135 292 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 CCSMST1Q4G0I0 132 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 TCAIMQ8N3R3 496 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 PDXPQ96GD0 296 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 STN1Q9H668 368 aaKnown RBP25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 KLC4Q9NSK0 619 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 DNAJC28Q9NX36 388 aa25.39■■□□□ 1.66
SCAMP4-210ENST00000588555 SLCO1B7G3V0H7 640 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 GDF5P43026 501 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 VWA5B1Q5TIE3 1220 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 ENPP7Q6UWV6 458 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 HGH1Q9BTY7 390 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 WWP1Q9H0M0 922 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 MID1IP1Q9NPA3 183 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 VTI1BQ9UEU0 232 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 MOSPD1Q9UJG1 213 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 ZNF225Q9UK10 706 aa25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 PNMA8BQ9ULN7 279 aaPredicted RBP25.39■■□□□ 1.65
SCAMP4-210ENST00000588555 PI15O43692 258 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 MLYCDO95822 493 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 MAP4P27816 1152 aaKnown RBP25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 HTR1BP28222 390 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 GNPDA1P46926 289 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 SLC6A12P48065 614 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 IDH3AP50213 366 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 IFT88Q13099 833 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 EPGNQ6UW88 154 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 Q6ZSR6 202 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 GOLGA7Q7Z5G4 137 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 SPATS2Q86XZ4 545 aaKnown RBP25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 OR13H1Q8NG92 308 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 FBXL8Q96CD0 374 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 PCED1AQ9H1Q7 454 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 GPR27Q9NS67 375 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 ABCF3Q9NUQ8 709 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 ACSL5Q9ULC5 683 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 PLEKHM1Q9Y4G2 1056 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 TRAF6Q9Y4K3 522 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 ST14Q9Y5Y6 855 aa25.38■■□□□ 1.65
SCAMP4-210ENST00000588555 TNFRSF10CO14798 259 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 KCNJ13O60928 360 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 JUNP05412 331 aaKnown RBP25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 FGF4P08620 206 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 PRDX3P30048 256 aaKnown RBP25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 RABIFP47224 123 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 TUBB3Q13509 450 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 GTF2H2Q13888 395 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 FAM219BQ5XKK7 198 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 GTF2H2CQ6P1K8 395 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 UNC5DQ6UXZ4 953 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 KIRREL3Q8IZU9 778 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 SLC22A18ASQ8N1D0 253 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 CARS2Q9HA77 564 aaKnown RBP25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 INVSQ9Y283 1065 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 SLCO1B1Q9Y6L6 691 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 EML5Q05BV3 1969 aa25.37■■□□□ 1.65
SCAMP4-210ENST00000588555 PABPN1LA6NDY0 278 aaKnown RBP25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 K7EPI3 171 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 CCNT2O60583 730 aaKnown RBP25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 STK16O75716 305 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 MAGEA9P43362 315 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 TTC23LQ6PF05 361 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 TRPM8Q7Z2W7 1104 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 TEX9Q8N6V9 391 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 CADM4Q8NFZ8 388 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 EDAQ92838 391 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 CCDC138Q96M89 665 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 OR2M4Q96R27 311 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 ZNF382Q96SR6 550 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 OPTCQ9UBM4 332 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 HEY2Q9UBP5 337 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 PSMD13Q9UNM6 376 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 KCNK6Q9Y257 313 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 GPSM3Q9Y4H4 160 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 LRP4O75096 1905 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 METTL12A8MUP2 240 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 OR7A17O14581 309 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 AXIN1O15169 862 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 NDUFS2O75306 463 aa25.36■■□□□ 1.65
SCAMP4-210ENST00000588555 THOP1P52888 689 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms