RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 ATP5DP30049 168 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 FMO4P31512 558 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 SHMT2P34897 504 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 ARL4CP56559 192 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 PPP1CAP62136 330 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 CLN3Q13286 438 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 HIF1AQ16665 826 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 BBS9Q3SYG4 887 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 MSS51Q4VC12 460 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 UNC5DQ6UXZ4 953 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 OTOAQ7RTW8 1153 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 KCNMB4Q86W47 210 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 DTX1Q86Y01 620 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 VRK3Q8IV63 474 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 NAF1Q96HR8 494 aaKnown RBP15.6■□□□□ 0.09
RETREG3-206ENST00000588423 C16orf45Q96MC5 204 aaPredicted RBP15.6■□□□□ 0.09
RETREG3-206ENST00000588423 MAP3K3Q99759 626 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 HGH1Q9BTY7 390 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 POMT2Q9UKY4 750 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 CRYL1Q9Y2S2 319 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 PCDHB11Q9Y5F2 797 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 B3GALT1Q9Y5Z6 326 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 EPG5Q9HCE0 2579 aa15.6■□□□□ 0.09
RETREG3-206ENST00000588423 KIF26BQ2KJY2 2108 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 IGHV5-51A0A0C4DH38 117 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 POLR1CO15160 346 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-206ENST00000588423 POLR2CP19387 275 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-206ENST00000588423 SLC1A2P43004 574 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 RPL21P46778 160 aaKnown RBP15.59■□□□□ 0.09
RETREG3-206ENST00000588423 SEPHS1P49903 392 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 KPNA2P52292 529 aaKnown RBP15.59■□□□□ 0.09
RETREG3-206ENST00000588423 CSE1LP55060 971 aaKnown RBP15.59■□□□□ 0.09
RETREG3-206ENST00000588423 PRKG2Q13237 762 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 GBX1Q14549 363 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 IL11RAQ14626 422 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 COL28A1Q2UY09 1125 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 ZNF789Q5FWF6 425 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 ANKS6Q68DC2 871 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 DENND6AQ8IWF6 608 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 GSDMBQ8TAX9 411 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 PMEPA1Q969W9 287 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 ERP44Q9BS26 406 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 TRIM31Q9BZY9 425 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 TWSG1Q9GZX9 223 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 C1GALT1Q9NS00 363 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 OR6C2Q9NZP2 312 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 KLHL42Q9P2K6 505 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 FBXO5Q9UKT4 447 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 ICKQ9UPZ9 632 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 MRFAP1Q9Y605 127 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 COMMD10Q9Y6G5 202 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 TEX264Q9Y6I9 313 aa15.59■□□□□ 0.09
RETREG3-206ENST00000588423 ZZEF1O43149 2961 aa15.58■□□□□ 0.09
RETREG3-206ENST00000588423 C2orf74A8MZ97 194 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 E7ESA3 106 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 BTN3A3O00478 584 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 BTN3A1O00481 513 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 RAD51CO43502 376 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 NIPSNAP2O75323 286 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 BANF1O75531 89 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 ZBTB11O95625 1053 aaPredicted RBP15.58■□□□□ 0.08
RETREG3-206ENST00000588423 CHRM3P20309 590 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 ELK3P41970 407 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 TMPRSS3P57727 454 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 HSD11B2P80365 405 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 CKAP4Q07065 602 aaKnown RBP15.58■□□□□ 0.08
RETREG3-206ENST00000588423 C2orf54Q08AI8 447 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 CTBP1Q13363 440 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 FRG1Q14331 258 aaKnown RBP15.58■□□□□ 0.08
RETREG3-206ENST00000588423 HSP90AA5PQ58FG0 334 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 C19orf48Q6RUI8 117 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 BPHLQ86WA6 291 aaPredicted RBP15.58■□□□□ 0.08
RETREG3-206ENST00000588423 ZFAND4Q86XD8 727 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 IGDCC3Q8IVU1 814 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 DCUN1D3Q8IWE4 304 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 CNTN4Q8IWV2 1026 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 ADGRF3Q8IZF5 1079 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 D2HGDHQ8N465 521 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 C2CD4AQ8NCU7 369 aaPredicted RBP15.58■□□□□ 0.08
RETREG3-206ENST00000588423 KCNJ9Q92806 393 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 SPRY4Q9C004 299 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 CCDC68Q9H2F9 335 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 APMAPQ9HDC9 416 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 FBXO6Q9NRD1 293 aaPredicted RBP15.58■□□□□ 0.08
RETREG3-206ENST00000588423 WHRNQ9P202 907 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 CDC23Q9UJX2 597 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 SNX24Q9Y343 169 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 PIKFYVEQ9Y2I7 2098 aa15.58■□□□□ 0.08
RETREG3-206ENST00000588423 APC2O95996 2303 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 GSAPA4D1B5 854 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 E5RI56 91 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 TPBGLP0DKB5 382 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 FGF5P12034 268 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 PRDX3P30048 256 aaKnown RBP15.57■□□□□ 0.08
RETREG3-206ENST00000588423 SH3BP2P78314 561 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 ACY1Q03154 408 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 ABRQ12979 859 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 CALCOCO2Q13137 446 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 KYNUQ16719 465 aa15.57■□□□□ 0.08
RETREG3-206ENST00000588423 STEAP4Q687X5 459 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms