RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 SYTL2Q9HCH5 934 aa16.42■□□□□ 0.22
TMED1-203ENST00000588259 NLE1Q9NVX2 485 aaPredicted RBP16.42■□□□□ 0.22
TMED1-203ENST00000588259 IRAK4Q9NWZ3 460 aa16.42■□□□□ 0.22
TMED1-203ENST00000588259 MAP10Q9P2G4 905 aa16.42■□□□□ 0.22
TMED1-203ENST00000588259 AMFRQ9UKV5 643 aa16.42■□□□□ 0.22
TMED1-203ENST00000588259 TCFL5Q9UL49 500 aa16.42■□□□□ 0.22
TMED1-203ENST00000588259 VPS4AQ9UN37 437 aa16.42■□□□□ 0.22
TMED1-203ENST00000588259 ASF1AQ9Y294 204 aa16.42■□□□□ 0.22
TMED1-203ENST00000588259 TDRKHQ9Y2W6 561 aaKnown RBP16.42■□□□□ 0.22
TMED1-203ENST00000588259 REXO2Q9Y3B8 237 aaKnown RBP16.42■□□□□ 0.22
TMED1-203ENST00000588259 USP9YO00507 2555 aaPredicted RBP16.42■□□□□ 0.22
TMED1-203ENST00000588259 USP9XQ93008 2570 aaPredicted RBP16.42■□□□□ 0.22
TMED1-203ENST00000588259 E7EQ34 232 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 TMEM63AO94886 807 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 METTL18O95568 372 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 RAB40ALP0C0E4 278 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 CD151P48509 253 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 ZNF75DP51815 510 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 VAV2P52735 878 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 LAMB3Q13751 1172 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 BOP1Q14137 746 aaKnown RBP16.41■□□□□ 0.22
TMED1-203ENST00000588259 NADK2Q4G0N4 442 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 FAM198BQ6UWH4 519 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 ZNF517Q6ZMY9 492 aaPredicted RBP16.41■□□□□ 0.22
TMED1-203ENST00000588259 PIANPQ8IYJ0 282 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 OR5AR1Q8NGP9 310 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 CPT1CQ8TCG5 803 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 STYXQ8WUJ0 223 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 ELMO1Q92556 727 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 TRAPPC9Q96Q05 1148 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 C19orf43Q9BQ61 176 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 PITPNM3Q9BZ71 974 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 TFB2MQ9H5Q4 396 aaKnown RBP16.41■□□□□ 0.22
TMED1-203ENST00000588259 PCMTD2Q9NV79 361 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 LUZP4Q9P127 313 aa16.41■□□□□ 0.22
TMED1-203ENST00000588259 PACSIN2Q9UNF0 486 aaPredicted RBP16.41■□□□□ 0.22
TMED1-203ENST00000588259 PCDHGA9Q9Y5G4 932 aaKnown RBP16.41■□□□□ 0.22
TMED1-203ENST00000588259 TRBV5-4A0A0C4DH59 114 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 BTNL10A8MVZ5 291 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 ZNF185O15231 689 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 ZNF749O43361 778 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 AP2A2O94973 939 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 FTCDO95954 541 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 FTH1P02794 183 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 AGXTP21549 392 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 MSNP26038 577 aaKnown RBP16.4■□□□□ 0.22
TMED1-203ENST00000588259 OTX2P32243 289 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 SHMT2P34897 504 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 RORAP35398 523 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 UQCRFS1P47985 274 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 NCF4Q15080 339 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 KYNUQ16719 465 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 DEFB110Q30KQ9 67 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 CCDC38Q502W7 563 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 KCTD11Q693B1 232 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 SPESP1Q6UW49 350 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 RAD9BQ6WBX8 426 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 CDHR3Q6ZTQ4 885 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 C19orf47Q8N9M1 422 aaKnown RBP16.4■□□□□ 0.22
TMED1-203ENST00000588259 LRRC57Q8N9N7 239 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMED1-203ENST00000588259 CDKN2AIPNLQ96HQ2 116 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 TMEM121Q9BTD3 319 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 ICKQ9UPZ9 632 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 PADI2Q9Y2J8 665 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 ZNF451Q9Y4E5 1061 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 SNRNP200O75643 2136 aaKnown RBP16.4■□□□□ 0.22
TMED1-203ENST00000588259 CCDC88CQ9P219 2028 aa16.4■□□□□ 0.22
TMED1-203ENST00000588259 BLACEA4D250 179 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 OR51F1A6NGY5 319 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 H7C0S8 307 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 LIN7AO14910 233 aaPredicted RBP16.39■□□□□ 0.21
TMED1-203ENST00000588259 PSMD3O43242 534 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 OR2B3O76000 313 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 AP2A1O95782 977 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 GAS8O95995 478 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 GSTM1P09488 218 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 GP1BBP13224 206 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 UGT2B7P16662 529 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 GNLYP22749 145 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 CD97P48960 835 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 CSE1LP55060 971 aaKnown RBP16.39■□□□□ 0.21
TMED1-203ENST00000588259 GDF10P55107 478 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 GSTM4Q03013 218 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 RAPSNQ13702 412 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 ATP1A4Q13733 1029 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 ZNF789Q5FWF6 425 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 C1orf189Q5VU69 101 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 NAPRTQ6XQN6 538 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 RAB43Q86YS6 212 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 ADGRF3Q8IZF5 1079 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 SYCE1Q8N0S2 351 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 DNAAF3Q8N9W5 541 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 MFRPQ9BY79 579 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 LRRC4CQ9HCJ2 640 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 IMPACTQ9P2X3 320 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 GPN3Q9UHW5 284 aaPredicted RBP16.39■□□□□ 0.21
TMED1-203ENST00000588259 R3HDM2Q9Y2K5 976 aaKnown RBP16.39■□□□□ 0.21
TMED1-203ENST00000588259 FER1L5A0AVI2 2057 aa16.39■□□□□ 0.21
TMED1-203ENST00000588259 PRRC2CQ9Y520 2896 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms