RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 OTX2P32243 289 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ATP5OP48047 213 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ZNF140P52738 457 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-213ENST00000587604 RPA4Q13156 261 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 RAPSNQ13702 412 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 PRPSAP1Q14558 356 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 GPR33Q49SQ1 333 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ZNF658BQ4V348 819 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ZNF449Q6P9G9 518 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 CDHR3Q6ZTQ4 885 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 CCDC50Q8IVM0 306 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 GPR135Q8IZ08 494 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ADGRF3Q8IZF5 1079 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 IQCKQ8N0W5 287 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 PHC3Q8NDX5 983 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 OR13C4Q8NGS5 318 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 FER1L6-AS2Q96M78 137 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 NRTNQ99748 197 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 KLHL25Q9H0H3 589 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 FAM96AQ9H5X1 160 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 C10orf88Q9H8K7 445 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ZDHHC3Q9NYG2 299 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ACTR10Q9NZ32 417 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 B3GNT3Q9Y2A9 372 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
DNMT1-213ENST00000587604 AP1M2Q9Y6Q5 423 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 SVILO95425 2214 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 IGLV3-16A0A075B6K0 115 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 KRT86O43790 486 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 KLHL41O60662 606 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 CBX6O95503 412 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 IGHEP01854 428 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 CD63P08962 238 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 PDHA2P29803 388 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 TMPRSS15P98073 1019 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 OLIG2Q13516 323 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 BOP1Q14137 746 aaKnown RBP13.6□□□□□ -0.23
DNMT1-213ENST00000587604 MLIPQ5VWP3 458 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 IGFL3Q6UXB1 125 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 MAMDC2Q7Z304 686 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-213ENST00000587604 MRGPREQ86SM8 312 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 TFGQ92734 400 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-213ENST00000587604 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.6□□□□□ -0.23
DNMT1-213ENST00000587604 TCTN2Q96GX1 697 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 HEMGNQ9BXL5 484 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 GOLPH3Q9H4A6 298 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 XKR8Q9H6D3 395 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 ARNT2Q9HBZ2 717 aa13.6□□□□□ -0.23
DNMT1-213ENST00000587604 ERRFI1Q9UJM3 462 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-213ENST00000587604 H3BMH7 237 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 PEX12O00623 359 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 LDB2O43679 373 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 OR2B3O76000 313 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 LDLRP01130 860 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 ALPPP05187 535 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 GSTM1P09488 218 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 CBSLP0DN79 551 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 PSMB4P28070 264 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 MC4RP32245 332 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 CBSP35520 551 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 MARCKSL1P49006 195 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 COPS2P61201 443 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 GSTM4Q03013 218 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 PRKG2Q13237 762 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 MYBPC3Q14896 1274 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 NR6A1Q15406 480 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 KYNUQ16719 465 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 DCAF10Q5QP82 559 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 ANKRD20A2Q5SQ80 823 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 ANKRD20A1Q5TYW2 823 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 ANKRD20A3Q5VUR7 823 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 LYPLAL1Q5VWZ2 237 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 DENND5AQ6IQ26 1287 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 RHBDD2Q6NTF9 364 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 SPESP1Q6UW49 350 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 HOOK3Q86VS8 718 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 ZGRF1Q86YA3 2104 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 CISD2Q8N5K1 135 aaKnown RBP13.59□□□□□ -0.23
DNMT1-213ENST00000587604 CLEC1AQ8NC01 280 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 N4BP2L2Q92802 583 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-213ENST00000587604 HGH1Q9BTY7 390 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 CHRNA10Q9GZZ6 450 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 FAM60AQ9NP50 221 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 ASF1BQ9NVP2 202 aa13.59□□□□□ -0.23
DNMT1-213ENST00000587604 GPN3Q9UHW5 284 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-213ENST00000587604 FEZ2Q9UHY8 353 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-213ENST00000587604 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
DNMT1-213ENST00000587604 TRBV5-4A0A0C4DH59 114 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 H7C0S8 307 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 CCL22O00626 93 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.24
DNMT1-213ENST00000587604 ACRV1P26436 265 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 FOLR3P41439 243 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 MAGEA1P43355 309 aa13.58□□□□□ -0.24
DNMT1-213ENST00000587604 CDKN1CP49918 316 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-213ENST00000587604 DCDP81605 110 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms