RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CAPN3P20807 821 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 TACR1P25103 407 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 SPINT3P49223 89 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 AP2B1P63010 937 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 NAB1Q13506 487 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 REP15Q6BDI9 236 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 GRAMD4Q6IC98 578 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 ZNF621Q6ZSS3 439 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 RETREG3Q86VR2 466 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 OR10G6Q8NH81 332 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 SCRN2Q96FV2 425 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 ATOH8Q96SQ7 321 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 TRIM54Q9BYV2 358 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 RHBGQ9H310 441 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 STOML1Q9UBI4 398 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 ZNF225Q9UK10 706 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 PCYT1BQ9Y5K3 369 aaPredicted RBP10.07□□□□□ -0.8
RFFL-212ENST00000584655 FEZF1A0PJY2 475 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 STK16O75716 305 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 TGDSO95455 350 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 ETS2P15036 469 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 CCND1P24385 295 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 B4GALNT1Q00973 533 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 TMEM115Q12893 351 aaPredicted RBP10.07□□□□□ -0.8
RFFL-212ENST00000584655 PAGE3Q5JUK9 113 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 CATSPEREQ5SY80 951 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 SLC22A9Q8IVM8 553 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 NKAPQ8N5F7 415 aaKnown RBP10.07□□□□□ -0.8
RFFL-212ENST00000584655 RNF217Q8TC41 542 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 LRTOMTQ8WZ04 291 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 ZNF570Q96NI8 536 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 GBP5Q96PP8 586 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 LRRC3Q9BY71 257 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 EXD2Q9NVH0 621 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 ARIH1Q9Y4X5 557 aaPredicted RBP10.07□□□□□ -0.8
RFFL-212ENST00000584655 NYNRINQ9P2P1 1898 aaKnown RBP10.07□□□□□ -0.8
RFFL-212ENST00000584655 CCDC154A6NI56 674 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 SYCE1LA8MT33 242 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 CAPN14A8MX76 684 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 TM7SF2O76062 418 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 LBPP18428 481 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 DGKAP23743 735 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 SOAT1P35610 550 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 INPP5AQ14642 412 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 SCML4Q8N228 414 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 LIX1Q8N485 282 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 GPR150Q8NGU9 434 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 OR6Y1Q8NGX8 325 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 CNDP1Q96KN2 507 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 RNF145Q96MT1 663 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 DPP7Q9UHL4 492 aa10.07□□□□□ -0.8
RFFL-212ENST00000584655 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.07□□□□□ -0.8
RFFL-212ENST00000584655 MAGED1Q9Y5V3 778 aaPredicted RBP10.07□□□□□ -0.8
RFFL-212ENST00000584655 ZFHX2Q9C0A1 2572 aaPredicted RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 PRORSD1PA6NEY8 169 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 H3BM21 787 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ZNF682O95780 498 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ACRV1P26436 265 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 PRKAG1P54619 331 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 AQP4P55087 323 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 DNAL1Q4LDG9 190 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 INO80DQ53TQ3 878 aaPredicted RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 SPANXN4Q5MJ08 99 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 C6orf52Q5T4I8 152 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 Q6ZNB5 142 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 Q7L0L9 218 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 HEATR4Q86WZ0 1026 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 OR4K1Q8NGD4 311 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 KIAA1191Q96A73 305 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 TRMT2BQ96GJ1 504 aaKnown RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 ECSITQ9BQ95 431 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 TMEM245Q9H330 911 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 IRAK4Q9NWZ3 460 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 FBXL12Q9NXK8 326 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 GNGT2O14610 69 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 CACNG3O60359 315 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 LILRB3O75022 631 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 POP7O75817 140 aaKnown RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 ESR1P03372 595 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ANXA5P08758 320 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 C6P13671 934 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 SKIV2L2P42285 1042 aaKnown RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 CLCNKAP51800 687 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 PLA2G16P53816 162 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 POLR2LP62875 67 aaKnown RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 CYP51A1Q16850 503 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 OLIG3Q7RTU3 272 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 CELF5Q8N6W0 485 aaKnown RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 RASGEF1AQ8N9B8 481 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 CXorf40AQ8TE69 158 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 SMARCD2Q92925 531 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ARRDC3Q96B67 414 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ZNF599Q96NL3 588 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 TRIM4Q9C037 500 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 MKRN2Q9H000 416 aaKnown RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 STN1Q9H668 368 aaKnown RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 CTPS2Q9NRF8 586 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 CROTQ9UKG9 612 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ASB3Q9Y575 518 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 OAS3Q9Y6K5 1087 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms