RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 CD97P48960 835 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MAGOHP61326 146 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CDK16Q00536 496 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CDK18Q07002 472 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GTF2H3Q13889 308 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GPR18Q14330 331 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RASA2Q15283 850 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PCSK7Q16549 785 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BBS9Q3SYG4 887 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TEX44Q53QW1 395 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 AGAP9Q5VTM2 703 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 IRGCQ6NXR0 463 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 WASH2PQ6VEQ5 465 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PPP1R21Q6ZMI0 780 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ARHGEF18Q6ZSZ5 1173 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FAM92BQ6ZTR7 304 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 C3orf62Q6ZUJ4 267 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF534Q76KX8 674 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ANKMY2Q8IV38 441 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZBED8Q8IZ13 594 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CYP4X1Q8N118 509 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CNTD1Q8N815 330 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EPS8L3Q8TE67 593 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PYROXD1Q8WU10 500 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KLHL6Q8WZ60 621 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 IMP4Q96G21 291 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SIGLEC10Q96LC7 697 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TRIB3Q96RU7 358 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SRPK1Q96SB4 655 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PLAC1Q9HBJ0 212 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PDE7BQ9NP56 450 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC40A1Q9NP59 571 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LHX9Q9NQ69 397 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 WASH6PQ9NQA3 447 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EIF2B3Q9NR50 452 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EPHA6Q9UF33 1036 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TRHDEQ9UKU6 1024 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PCDHGA6Q9Y5G7 932 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 HECTD1Q9ULT8 2610 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BLACEA4D250 179 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 OR52A4PA6NMU1 304 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 C21orf140B9A014 251 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 K7EM74 188 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SHOX2O60902 331 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KCNJ13O60928 360 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 AVILO75366 819 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 STK10O94804 968 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 APRTP07741 180 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FURINP09958 794 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MLNP12872 115 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BRAFP15056 766 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BPIP17213 487 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 NELFEP18615 380 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SSTR1P30872 391 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ELK3P41970 407 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GRIA1P42261 906 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 HALP42357 657 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLCO1A2P46721 670 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MLLT10P55197 1068 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC14A2Q15849 920 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LONRF1Q17RB8 773 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TUBB8Q3ZCM7 444 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CCDC38Q502W7 563 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LRRC8BQ6P9F7 803 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PID1Q7Z2X4 250 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TMEM135Q86UB9 458 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EXOC3L1Q86VI1 746 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TRAPPC5Q8IUR0 188 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF547Q8IVP9 402 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PALM2Q8IXS6 379 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SIDT2Q8NBJ9 832 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FBXO36Q8NEA4 188 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GDAP1Q8TB36 358 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BRSK1Q8TDC3 778 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CT55Q8WUE5 264 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LRRC39Q96DD0 335 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TEKT5Q96M29 485 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 AGAP3Q96P47 875 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 VPS35Q96QK1 796 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FERMT1Q9BQL6 677 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GORASP1Q9BQQ3 440 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 DHRS4Q9BTZ2 278 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CEP41Q9BYV8 373 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RAB33BQ9H082 229 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC25A51Q9H1U9 297 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CENPHQ9H3R5 247 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FETUBQ9UGM5 382 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TLK1Q9UKI8 766 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RARRES3Q9UL19 164 aa9.49□□□□□ -0.89
CDK5RAP3-227ENST00000583352 VPS4BO75351 444 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SUN1O94901 812 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 NDST3O95803 873 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 C1QAP02745 245 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GSTA2P09210 222 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ARL4DP49703 201 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PPP2R2AP63151 447 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ACY1Q03154 408 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TMEM115Q12893 351 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TUBB3Q13509 450 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms