RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 H3BMM5 538 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 NDC80O14777 642 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 KPNA5O15131 536 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 RAD51CO43502 376 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 GPC4O75487 556 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 URI1O94763 535 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 TTC4O95801 387 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 ESR1P03372 595 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 F7P08709 466 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 PKMP14618 531 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 CHRM3P20309 590 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 SLC1A2P43004 574 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 RPL21P46778 160 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 ARL4DP49703 201 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 ARL4CP56559 192 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 MC2RQ01718 297 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 CKAP4Q07065 602 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 FOXM1Q08050 763 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 ABRQ12979 859 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 HSP90AA5PQ58FG0 334 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 ZNF789Q5FWF6 425 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 SPANXN3Q5MJ09 141 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 AMIGO1Q86WK6 493 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 ZFAND4Q86XD8 727 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 LMNTD2Q8IXW0 634 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 TBC1D21Q8IYX1 336 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 UNC5BQ8IZJ1 945 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 BMPERQ8N8U9 685 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 SKA2Q8WVK7 121 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 UBXN4Q92575 508 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 CFAP36Q96G28 342 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 BIRC8Q96P09 236 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 CD180Q99467 661 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 NRTNQ99748 197 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 MAP3K3Q99759 626 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 FAM167BQ9BTA0 163 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 NAT9Q9BTE0 207 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 DDA1Q9BW61 102 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 ASPSCR1Q9BZE9 553 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 DPH1Q9BZG8 443 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 CCDC68Q9H2F9 335 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 TFB2MQ9H5Q4 396 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 XKR8Q9H6D3 395 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 IARS2Q9NSE4 1012 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 POLG2Q9UHN1 485 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 TSR3Q9UJK0 312 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 CHMP2BQ9UQN3 213 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 CDYLQ9Y232 598 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 PCDHGA3Q9Y5H0 932 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 B3GALT1Q9Y5Z6 326 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 KMT2BQ9UMN6 2715 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 IGHV5-51A0A0C4DH38 117 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 TLCD2A6NGC4 264 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 BTN3A1O00481 513 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 POLR1CO15160 346 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 LAMA5O15230 3695 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 KDM1AO60341 852 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 S1PR4O95977 384 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 RPN2P04844 631 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ERVK-10P10266 1014 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 LIPCP11150 499 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 CD82P27701 267 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 SHMT2P34897 504 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ELK3P41970 407 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ADARP55265 1226 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 SH3BP2P78314 561 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 TLE3Q04726 772 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 CALCOCO2Q13137 446 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 CLN3Q13286 438 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 PLEKHS1Q5SXH7 462 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 CEACAM20Q6UY09 585 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 PKD1L2Q7Z442 2459 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ANKMY2Q8IV38 441 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 IGDCC3Q8IVU1 814 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 BBOF1Q8ND07 529 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 OR5K2Q8NHB8 316 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 GABPB2Q8TAK5 448 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 KLHL6Q8WZ60 621 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 OR6C1Q96RD1 312 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ERP44Q9BS26 406 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 B3GNT4Q9C0J1 378 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 APMAPQ9HDC9 416 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 PPANQ9NQ55 473 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 FBXO8Q9NRD0 319 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 SIDT1Q9NXL6 827 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ZC3H7BQ9UGR2 993 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 CDC23Q9UJX2 597 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 FBXO5Q9UKT4 447 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ACSL6Q9UKU0 697 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 PLAGL1Q9UM63 463 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 ICKQ9UPZ9 632 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 PCDHB11Q9Y5F2 797 aa12.24□□□□□ -0.45
SMARCE1-218ENST00000582955 STMND1H3BQB6 276 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 MATN2O00339 956 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 BTN3A3O00478 584 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 SLCO2B1O94956 709 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 NELFEP18615 380 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 CDH3P22223 829 aa12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 KPNA2P52292 529 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-218ENST00000582955 MPP1Q00013 466 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms