RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CILP2Q8IUL8 1156 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 LRRC34Q8IZ02 419 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 EID2Q8N6I1 236 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 CCDC63Q8NA47 563 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 PPP1R14CQ8TAE6 165 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 SGF29Q96ES7 293 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 LINC00615Q96LM1 132 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 FAM111AQ96PZ2 611 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 GPR22Q99680 433 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 BOCQ9BWV1 1114 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 PITPNM3Q9BZ71 974 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 FTSJ1Q9UET6 329 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 GNPTGQ9UJJ9 305 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 PLLPQ9Y342 182 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 PRKAB1Q9Y478 270 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 PCDHB1Q9Y5F3 818 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 A0A087X1B8 175 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 UBA6A0AVT1 1052 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 MGAT4DA6NG13 374 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 GOLGA8TH3BQL2 631 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 KLF11O14901 512 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 YY2O15391 372 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 POP7O75817 140 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 PLA2G2AP14555 144 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 RPS3P23396 243 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 PRKAA2P54646 552 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 WDR4P57081 412 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 POU4F1Q01851 419 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 DMPKQ09013 629 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 C19orf57Q0VDD7 668 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 SEMA3AQ14563 771 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 TCEA2Q15560 299 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 DEFB133Q30KQ1 61 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 PLA2G4EQ3MJ16 856 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 PTRHD1Q6GMV3 140 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 RAPH1Q70E73 1250 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNF547Q8IVP9 402 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 FAM181AQ8N9Y4 354 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 C2CD4AQ8NCU7 369 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 FAM46DQ8NEK8 389 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 RDH11Q8TC12 318 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 HM13Q8TCT9 377 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 UBL7Q96S82 380 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 OSGEPL1Q9H4B0 414 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 PRORYQ9H606 182 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 MANSC1Q9H8J5 431 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 MLXIPLQ9NP71 852 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 SNX15Q9NRS6 342 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 TAAR2Q9P1P5 351 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 KLHL14Q9P2G3 628 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 FBXO5Q9UKT4 447 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 KCNK6Q9Y257 313 aa13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-220ENST00000581737 C17orf113A0A1B0GUU1 675 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 TNFSF14O43557 240 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 PIAS1O75925 651 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 LDOC1O95751 146 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 ESR1P03372 595 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 CELA2BP08218 269 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 DHRS4L1P0CG22 281 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 STMN1P16949 149 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 IDSP22304 550 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 AK4P27144 223 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 SLC1A2P43004 574 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 MAGEA12P43365 314 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 ABCG1P45844 678 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 SERPINB4P48594 390 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 DUSP3P51452 185 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 MPP2Q14168 576 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 USP10Q14694 798 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 KLC3Q6P597 504 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 PCSK4Q6UW60 755 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 SPATA21Q7Z572 469 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 LDB1Q86U70 411 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 NRROSQ86YC3 692 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 GALNT15Q8N3T1 639 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 CLDN19Q8N6F1 224 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 ARL10Q8N8L6 244 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 GBP7Q8N8V2 638 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 AVL9Q8NBF6 648 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 OR2L2Q8NH16 312 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 CCL4L1Q8NHW4 92 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 LPGAT1Q92604 370 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 SEC16BQ96JE7 1060 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 PANX3Q96QZ0 392 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 CCM2Q9BSQ5 444 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 CCDC68Q9H2F9 335 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 DPEP2Q9H4A9 486 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 IL1RAPL1Q9NZN1 696 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 ACSL5Q9ULC5 683 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 PCYT1BQ9Y5K3 369 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 COMMD10Q9Y6G5 202 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 ASXL3Q9C0F0 2248 aa13.2□□□□□ -0.3
CSNK1D-220ENST00000581737 MGAQ8IWI9 3026 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms