RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 GSTM1P09488 218 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 CYP2A7P20853 494 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 VARSP26640 1264 aaKnown RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 PDHA2P29803 388 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 CTNNA1P35221 906 aaKnown RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 PTPN7P35236 360 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 RRADP55042 308 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 EIF3EP60228 445 aaKnown RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 TMPRSS15P98073 1019 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 GSTM4Q03013 218 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 BOP1Q14137 746 aaKnown RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 NCF4Q15080 339 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 SKOR2Q2VWA4 1001 aaPredicted RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 CCDC181Q5TID7 509 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 FAM69BQ5VUD6 431 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 ZNF385CQ66K41 422 aaPredicted RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 ZNF449Q6P9G9 518 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 SARM1Q6SZW1 724 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 CDHR3Q6ZTQ4 885 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 AMIGO1Q86WK6 493 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 CDKL3Q8IVW4 592 aaPredicted RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 CCDC170Q8IYT3 715 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 ADGRF3Q8IZF5 1079 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 RBMXL3Q8N7X1 1067 aaKnown RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 TC2NQ8N9U0 490 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 Q8NA96 180 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 OR52E1Q8NGJ3 308 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 CCDC110Q8TBZ0 833 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 TFGQ92734 400 aaPredicted RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 SPATA13Q96N96 652 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 SMAD5Q99717 465 aaKnown RBP10.27□□□□□ -0.77
RFFL-209ENST00000581265 NRTNQ99748 197 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 DHRS4Q9BTZ2 278 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 NUDT9Q9BW91 350 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 OSBPL8Q9BZF1 889 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 CHRNA10Q9GZZ6 450 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 VPS37BQ9H9H4 285 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 TFR2Q9UP52 801 aa10.27□□□□□ -0.77
RFFL-209ENST00000581265 C2orf74A8MZ97 194 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 TCP11X1B4DZS4 312 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 E7EQ34 232 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 H3BMH7 237 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 CCL22O00626 93 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 ZNF185O15231 689 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 PJA2O43164 708 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 ZNF749O43361 778 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 ZNF189O75820 626 aaPredicted RBP10.26□□□□□ -0.77
RFFL-209ENST00000581265 KLF7O75840 302 aaPredicted RBP10.26□□□□□ -0.77
RFFL-209ENST00000581265 PVRP15151 417 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 AGXTP21549 392 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 ACRV1P26436 265 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 MC4RP32245 332 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 LMAN1P49257 510 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 CDKN1CP49918 316 aaPredicted RBP10.26□□□□□ -0.77
RFFL-209ENST00000581265 PRKG2Q13237 762 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 SPARCL1Q14515 664 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 SSPNQ14714 243 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 SPA17Q15506 151 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 PTCHD3Q3KNS1 767 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 KCTD11Q693B1 232 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 DARS2Q6PI48 645 aaKnown RBP10.26□□□□□ -0.77
RFFL-209ENST00000581265 SERPINA9Q86WD7 417 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 CLDN19Q8N6F1 224 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.26□□□□□ -0.77
RFFL-209ENST00000581265 PNPLA2Q96AD5 504 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 LRRC45Q96CN5 670 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 TCTN2Q96GX1 697 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 CDKN2AIPNLQ96HQ2 116 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 CALR3Q96L12 384 aaKnown RBP10.26□□□□□ -0.77
RFFL-209ENST00000581265 IP6K3Q96PC2 410 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 TBL1YQ9BQ87 522 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 SLC7A5P2Q9GIP4 190 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 SLAMF7Q9NQ25 335 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 LUC7LQ9NQ29 371 aaKnown RBP10.26□□□□□ -0.77
RFFL-209ENST00000581265 NLE1Q9NVX2 485 aaPredicted RBP10.26□□□□□ -0.77
RFFL-209ENST00000581265 GPR83Q9NYM4 423 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 ACTR10Q9NZ32 417 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 C5AR2Q9P296 337 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 MAP10Q9P2G4 905 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 PADI2Q9Y2J8 665 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 AP1M2Q9Y6Q5 423 aa10.26□□□□□ -0.77
RFFL-209ENST00000581265 SPENQ96T58 3664 aaKnown RBP10.25□□□□□ -0.77
RFFL-209ENST00000581265 A6NL46 340 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 C9J4A7 227 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 LIN7AO14910 233 aaPredicted RBP10.25□□□□□ -0.77
RFFL-209ENST00000581265 AP2A2O94973 939 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 TJP3O95049 919 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 CD63P08962 238 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 RNF224P0DH78 156 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 PSMA3P25788 255 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 CTNNA2P26232 953 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 ACADLP28330 430 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 GABRA4P48169 554 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 RWDD2BP57060 319 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 CACNG1Q06432 222 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 PARP6Q2NL67 630 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 EIF2S3LQ2VIR3 472 aaKnown RBP10.25□□□□□ -0.77
RFFL-209ENST00000581265 ZRANB3Q5FWF4 1079 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 C1QL3Q5VWW1 255 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms