RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ARMC10Q8N2F6 343 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 NAT8LQ8N9F0 302 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 LRRC58Q96CX6 371 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 POLR2J2Q9GZM3 115 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 ZNF69Q9UC07 566 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 RUVBL1Q9Y265 456 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 DAPL1A0PJW8 107 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 TPST2O60704 377 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 PPP1R11O60927 126 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 ATXN1P54253 815 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 YBEYP58557 167 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 MVKQ03426 396 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 CBLBQ13191 982 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 GPC2Q8N158 579 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 OXR1Q8N573 874 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 OR2L3Q8NG85 312 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 DQX1Q8TE96 717 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 ATG10Q9H0Y0 220 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 UCKL1Q9NWZ5 548 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 COLEC10Q9Y6Z7 277 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 GMFGO60234 142 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 PRH1P02810 166 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 CLUP10909 449 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 PTGER3P43115 390 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 XKP51811 444 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 TXNL4AP83876 142 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 DEFA5Q01523 94 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 GNA12Q03113 381 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 CBFBQ13951 182 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 PRAMEF19Q5SWL8 479 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 RC3H2Q9HBD1 1191 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 FBXW11Q9UKB1 542 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 PPM1HQ9ULR3 514 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 PCDHGB7Q9Y5F8 929 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 NID2Q14112 1375 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 SLC7A4O43246 635 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 EIF5AP63241 154 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 TUBA1BP68363 451 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 BNIP3Q12983 259 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 NDUFA9Q16795 377 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 ATXN7L2Q5T6C5 722 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 FAAH2Q6GMR7 532 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 TUBA1AQ71U36 451 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 DCBLD1Q8N8Z6 715 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 DPEP3Q9H4B8 488 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 CHMP1AQ9HD42 196 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 SIX2Q9NPC8 291 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 CFAP97Q9P2B7 532 aa14.3□□□□□ -0.12
CSNK1D-217ENST00000581241 CPSF4LA6NMK7 179 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 HCN1O60741 890 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 ESR1P03372 595 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 ALPPP05187 535 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 DDX6P26196 483 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■□□□ 12.5
CSNK1D-217ENST00000581241 POMZP3Q6PJE2 187 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 ZNF517Q6ZMY9 492 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 CYP2U1Q7Z449 544 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 HID1Q8IV36 788 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 POFUT2Q9Y2G5 429 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 CMAHPQ9Y471 501 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 TCAF2A6NFQ2 919 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 NOTOA8MTQ0 251 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 TLR4O00206 839 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 AKAP8O43823 692 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 MATN4O95460 622 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 PCCBP05166 539 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 GNALP38405 381 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 STXBP1P61764 594 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 IL10RBQ08334 325 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 DPY19L1Q2PZI1 675 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 KIAA0930Q6ICG6 404 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 TUBA3EQ6PEY2 450 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 FEM1CQ96JP0 617 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 ZC3H10Q96K80 434 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 TMEM209Q96SK2 561 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 GPR20Q99678 358 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 IFT27Q9BW83 186 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 NIFKQ9BYG3 293 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 GLIS2Q9BZE0 524 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 DCSTAMPQ9H295 470 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 HMX1Q9NP08 348 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 CD84Q9UIB8 345 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 ABCG2Q9UNQ0 655 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 SPIN1Q9Y657 262 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 KDM4BO94953 1096 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 PEPDP12955 493 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 PBX3P40426 434 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 WDR4P57081 412 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 TAF10Q12962 218 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 BRSK1Q8TDC3 778 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 SLCO2A1Q92959 643 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 TMBIM1Q969X1 311 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 DUSP26Q9BV47 211 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 IRF2BPLQ9H1B7 796 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 TMLHEQ9NVH6 421 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 MRPS23Q9Y3D9 190 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 MAU2Q9Y6X3 613 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 PRORSD1PA6NEY8 169 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 C1RP00736 705 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 MAGEA2P43356 314 aa14.29□□□□□ -0.12
CSNK1D-217ENST00000581241 CXCL17Q6UXB2 119 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms