RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CDC42EP4Q9H3Q1 356 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 OSGEPL1Q9H4B0 414 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 PRORYQ9H606 182 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 STN1Q9H668 368 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 PPANQ9NQ55 473 aaKnown RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 PRDM8Q9NQV8 689 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 FBXO6Q9NRD1 293 aaPredicted RBP9.66□□□□□ -0.86
GGA3-209ENST00000580646 POT1Q9NUX5 634 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 NINJ2Q9NZG7 142 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 CRYL1Q9Y2S2 319 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 HEBP2Q9Y5Z4 205 aa9.66□□□□□ -0.86
GGA3-209ENST00000580646 HELZ2Q9BYK8 2649 aaKnown RBP9.65□□□□□ -0.86
GGA3-209ENST00000580646 TRBV23OR9-2A0A075B6M9 112 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 PDZK1P1A8MUH7 402 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CDRT15L2A8MXV6 281 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 E5RI56 91 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 HAUS5O94927 633 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 SLCO2B1O94956 709 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CPNE6O95741 557 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 EML2O95834 649 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 APOA4P06727 396 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 ITGA2BP08514 1039 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 ABHD2P08910 425 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 SLC35G4P0C7Q5 338 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 NDUFS1P28331 727 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 GABRB3P28472 473 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 PBLDP30039 288 aaPredicted RBP9.65□□□□□ -0.86
GGA3-209ENST00000580646 FMO4P31512 558 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CCR7P32248 378 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 SKIV2L2P42285 1042 aaKnown RBP9.65□□□□□ -0.86
GGA3-209ENST00000580646 MAPK9P45984 424 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 EPHA4P54764 986 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 MPP1Q00013 466 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 TMED2Q15363 201 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 KYNUQ16719 465 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 AMZ1Q400G9 498 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 ZNF789Q5FWF6 425 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 ICE2Q659A1 982 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 LRRC8EQ6NSJ5 796 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 UGT3A1Q6NUS8 523 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 ZNF549Q6P9A3 640 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CNSTQ6PJW8 725 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 USP53Q70EK8 1073 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 OTOAQ7RTW8 1153 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 TMPRSS9Q7Z410 1059 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CLEC14AQ86T13 490 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 PIM3Q86V86 326 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 SLITRK4Q8IW52 837 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 SLC22A15Q8IZD6 547 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 KCNE4Q8WWG9 221 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 TMEM159Q96B96 161 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CPNE1Q99829 537 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 AARSD1Q9BTE6 412 aaKnown RBP9.65□□□□□ -0.86
GGA3-209ENST00000580646 TXLNGYQ9BZA5 131 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 DPH1Q9BZG8 443 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 RHOJQ9H4E5 214 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 EPB41L1Q9H4G0 881 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 ACSS3Q9H6R3 686 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 RDH14Q9HBH5 336 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CPNE7Q9UBL6 633 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 CDYLQ9Y232 598 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 WDR37Q9Y2I8 494 aa9.65□□□□□ -0.86
GGA3-209ENST00000580646 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.87
GGA3-209ENST00000580646 PCM1Q15154 2024 aa9.65□□□□□ -0.87
GGA3-209ENST00000580646 LILRA5A6NI73 299 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 IFRD1O00458 451 aaPredicted RBP9.64□□□□□ -0.87
GGA3-209ENST00000580646 KLK10O43240 276 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 SNX2O60749 519 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 NIPSNAP2O75323 286 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 VPS26AO75436 327 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 JMJD7P0C870 316 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 CBSLP0DN79 551 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 MTHFD1P11586 935 aaKnown RBP9.64□□□□□ -0.87
GGA3-209ENST00000580646 HGFP14210 728 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 RPL10P27635 214 aaKnown RBP9.64□□□□□ -0.87
GGA3-209ENST00000580646 ACADLP28330 430 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 CD1CP29017 333 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 CBSP35520 551 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 GP5P40197 560 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 SLC19A1P41440 591 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 CLCN7P51798 805 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 HHEXQ03014 270 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 SQSTM1Q13501 440 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 BOP1Q14137 746 aaKnown RBP9.64□□□□□ -0.87
GGA3-209ENST00000580646 CLCA4Q14CN2 919 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 RPE65Q16518 533 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 TTLL9Q3SXZ7 439 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 KBTBD12Q3ZCT8 623 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 SYTL3Q4VX76 610 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 PHF19Q5T6S3 580 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 FAM45BPQ6NSW5 357 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 ZNF574Q6ZN55 896 aaPredicted RBP9.64□□□□□ -0.87
GGA3-209ENST00000580646 NEK10Q6ZWH5 1172 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 ZC3HC1Q86WB0 502 aaKnown RBP9.64□□□□□ -0.87
GGA3-209ENST00000580646 FAM45AQ8TCE6 357 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 LKAAEAR1Q8TD35 194 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 FBF1Q8TES7 1133 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 CXorf40BQ96DE9 158 aa9.64□□□□□ -0.87
GGA3-209ENST00000580646 RMDN2Q96LZ7 410 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms