RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 MRPL14Q6P1L8 145 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 TLDC1Q6P9B6 456 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ZNF449Q6P9G9 518 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 BZW1Q7L1Q6 419 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 PPP1R32Q7Z5V6 425 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 PARP9Q8IXQ6 854 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CFAP206Q8IYR0 622 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 PLD5Q8N7P1 536 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 HM13Q8TCT9 377 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ZNF398Q8TD17 642 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 DENND1AQ8TEH3 1009 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 LURAP1Q96LR2 239 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 RMDN2Q96LZ7 410 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 MAK16Q9BXY0 300 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 MVB12BQ9H7P6 319 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 OLAHQ9NV23 265 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 NUP210LQ5VU65 1888 aa11.8□□□□□ -0.52
CDK5RAP3-216ENST00000579853 C17orf113A0A1B0GUU1 675 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 BTN3A3O00478 584 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 BTN3A1O00481 513 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 STX7O15400 261 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ZSCAN9O15535 394 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 JRKO75564 520 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 POLBP06746 335 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 MMP11P24347 488 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CD151P48509 253 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 C1orf189Q5VU69 101 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 SLC9A4Q6AI14 798 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 SPESP1Q6UW49 350 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 DET1Q7L5Y6 550 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 AMIGO1Q86WK6 493 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 C19orf47Q8N9M1 422 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 BLOC1S5Q8TDH9 187 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 HEXDCQ8WVB3 486 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CPLX3Q8WVH0 158 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 DLG3Q92796 817 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 DCUN1D1Q96GG9 259 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 RBM41Q96IZ5 413 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CNDP1Q96KN2 507 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 TEKT5Q96M29 485 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 OLFM3Q96PB7 478 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 FERD3LQ96RJ6 166 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 HSD3B7Q9H2F3 369 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 MRM3Q9HC36 420 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 UVRAGQ9P2Y5 699 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 FAM8A1Q9UBU6 413 aa11.79□□□□□ -0.52
CDK5RAP3-216ENST00000579853 LRRD1A4D1F6 860 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CFAP99D6REC4 459 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 H3BMH7 237 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 GAPDHSO14556 408 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 APOL1O14791 398 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 GPR39O43194 453 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 PRAMEF1O95521 474 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 UMODP07911 640 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 PIM1P11309 404 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 COX6B1P14854 86 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 WNT3AP56704 352 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 INAQ16352 499 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.78□□□□□ -0.526e-6■□□□□ 8.6
CDK5RAP3-216ENST00000579853 VWA2Q5GFL6 755 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 FIGNQ5HY92 759 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 SIRPB2Q5JXA9 342 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ALKBH5Q6P6C2 394 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 RPTNQ6XPR3 784 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 BNC2Q6ZN30 1099 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ZNF808Q8N4W9 903 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 OR52E1Q8NGJ3 308 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 FKBP10Q96AY3 582 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 NDC1Q9BTX1 674 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 LHPPQ9H008 270 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ASB8Q9H765 288 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 WDR54Q9H977 334 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 VPS37BQ9H9H4 285 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 SLC6A20Q9NP91 592 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 ACTR10Q9NZ32 417 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 UBP1Q9NZI7 540 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 FBXL4Q9UKA2 621 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 CSAG2Q9Y5P2 127 aa11.78□□□□□ -0.52
CDK5RAP3-216ENST00000579853 C2orf81A6NN90 581 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ALBP02768 609 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SERPING1P05155 500 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 PVRP15151 417 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ITGAXP20702 1163 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 CAPN3P20807 821 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 HTR1EP28566 365 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 NR2C2P49116 596 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 PRLHRP49683 370 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 TAS2R40P59535 323 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 RPA4Q13156 261 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 PRKD1Q15139 912 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SLC1A5Q15758 541 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 SLC5A12Q1EHB4 618 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ZNF630Q2M218 657 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 KDELC1Q6UW63 502 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ISLR2Q6UXK2 745 aa11.77□□□□□ -0.53
CDK5RAP3-216ENST00000579853 ADGRF3Q8IZF5 1079 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms