RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 NLRP9Q7RTR0 991 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 TMEM135Q86UB9 458 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 RAB43Q86YS6 212 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 TBC1D21Q8IYX1 336 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 DSELQ8IZU8 1212 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 RNF10Q8N5U6 811 aaKnown RBP13.3□□□□□ -0.28
GGA3-208ENST00000579743 CLDN19Q8N6F1 224 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 GSDMBQ8TAX9 411 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 NAT14Q8WUY8 206 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 COL26A1Q96A83 441 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 TCTN2Q96GX1 697 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 IP6K3Q96PC2 410 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 DHRS4Q9BTZ2 278 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 PITPNM3Q9BZ71 974 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 TSGA10Q9BZW7 698 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 ING2Q9H160 280 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 ACTR10Q9NZ32 417 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 GPN3Q9UHW5 284 aaPredicted RBP13.3□□□□□ -0.28
GGA3-208ENST00000579743 VPS4AQ9UN37 437 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 ZNF148Q9UQR1 794 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 ZNF451Q9Y4E5 1061 aa13.3□□□□□ -0.28
GGA3-208ENST00000579743 PCDHGA9Q9Y5G4 932 aaKnown RBP13.3□□□□□ -0.28
GGA3-208ENST00000579743 ARGFXA6NJG6 315 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 TTLL8A6PVC2 850 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 FTCDO95954 541 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 IGHEP01854 428 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 VARSP26640 1264 aaKnown RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 PDHA2P29803 388 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 CDKN1CP49918 316 aaPredicted RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 RPS18P62269 152 aaKnown RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 PRAMEP78395 509 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 IGFBP7Q16270 282 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 DBN1Q16643 649 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 AARS2Q5JTZ9 985 aaKnown RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 TTC23LQ6PF05 361 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 FBXO38Q6PIJ6 1188 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 AFTPHQ6ULP2 937 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 SPESP1Q6UW49 350 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 PACS1Q6VY07 963 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 ZNF517Q6ZMY9 492 aaPredicted RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 SYTL1Q8IYJ3 562 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 ENDOVQ8N8Q3 282 aaKnown RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 CCDC89Q8N998 374 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 TMEM102Q8N9M5 508 aaPredicted RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 SLC35B2Q8TB61 432 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 DENND1AQ8TEH3 1009 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 TRAPPC9Q96Q05 1148 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 IRAK4Q9NWZ3 460 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 OR6C2Q9NZP2 312 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 TCFL5Q9UL49 500 aa13.29□□□□□ -0.28
GGA3-208ENST00000579743 TDRKHQ9Y2W6 561 aaKnown RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
GGA3-208ENST00000579743 ASH1LQ9NR48 2969 aaKnown RBP13.28□□□□□ -0.28
GGA3-208ENST00000579743 MROH6A6NGR9 719 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 AP3B1O00203 1094 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 BTN3A3O00478 584 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 KRT86O43790 486 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 DPM1O60762 260 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 OR2B3O76000 313 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 IFNB1P01574 187 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 ST6GAL1P15907 406 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 ADRA1DP25100 572 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 KLF1Q13351 362 aaPredicted RBP13.28□□□□□ -0.28
GGA3-208ENST00000579743 BRD3Q15059 726 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 FASTKD1Q53R41 847 aaKnown RBP13.28□□□□□ -0.28
GGA3-208ENST00000579743 ADGRF3Q8IZF5 1079 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 TAB3Q8N5C8 712 aaPredicted RBP13.28□□□□□ -0.28
GGA3-208ENST00000579743 C19orf47Q8N9M1 422 aaKnown RBP13.28□□□□□ -0.28
GGA3-208ENST00000579743 OR52K1Q8NGK4 314 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 OR6P1Q8NGX9 317 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 OR1L3Q8NH93 324 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 ASZ1Q8WWH4 475 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 SLC22A18Q96BI1 424 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 SGSM3Q96HU1 749 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 XKR8Q9H6D3 395 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 AKIRIN1Q9H9L7 192 aaPredicted RBP13.28□□□□□ -0.28
GGA3-208ENST00000579743 TXLNGQ9NUQ3 528 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 RIMKLBQ9ULI2 386 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 PACSIN2Q9UNF0 486 aaPredicted RBP13.28□□□□□ -0.28
GGA3-208ENST00000579743 SRPK3Q9UPE1 567 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 MRFAP1Q9Y605 127 aa13.28□□□□□ -0.28
GGA3-208ENST00000579743 SETXQ7Z333 2677 aaKnown RBP13.27□□□□□ -0.28
GGA3-208ENST00000579743 ISM1B1AKI9 464 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 PEX12O00623 359 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 DDX3YO15523 660 aaKnown RBP13.27□□□□□ -0.29
GGA3-208ENST00000579743 ZNF749O43361 778 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 TMEM63AO94886 807 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 APOA4P06727 396 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 NR1D1P20393 614 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 KIR2DS3Q14952 304 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 TMED2Q15363 201 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 DNAJC21Q5F1R6 531 aaKnown RBP13.27□□□□□ -0.29
GGA3-208ENST00000579743 C4orf22Q6V702 233 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 PIANPQ8IYJ0 282 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 RAB42Q8N4Z0 105 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 FAM26EQ8N5C1 309 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms