RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 OR8K5Q8NH50 307 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 OR5K2Q8NHB8 316 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 SLC39A7Q92504 469 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 SERPINB12Q96P63 405 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 HGH1Q9BTY7 390 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 ULBP3Q9BZM4 244 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 SYTL2Q9HCH5 934 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 PCYOX1Q9UHG3 505 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 CDYLQ9Y232 598 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 EIF4E1BA6NMX2 242 aaKnown RBP14.4□□□□□ -0.1
SS18-212ENST00000579061 C2orf74A8MZ97 194 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 BTN3A3O00478 584 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 BTN3A1O00481 513 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 SPAG6O75602 509 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 SLCO2B1O94956 709 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 MT-ND3P03897 115 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 RPN2P04844 631 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 ITGB2P05107 769 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 MSL3P1P0C860 447 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 SPTBP11277 2137 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 LIFP15018 202 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 FOLR1P15328 257 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 WT1P19544 449 aaPredicted RBP14.4□□□□□ -0.1
SS18-212ENST00000579061 CDH3P22223 829 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 AOAHP28039 575 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 PRDX3P30048 256 aaKnown RBP14.4□□□□□ -0.1
SS18-212ENST00000579061 SHMT2P34897 504 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TERF1P54274 439 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 ADARP55265 1226 aaKnown RBP14.4□□□□□ -0.1
SS18-212ENST00000579061 TUBB4BP68371 445 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 PRKG2Q13237 762 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TUBB3Q13509 450 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TUBB2AQ13885 445 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TMED2Q15363 201 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 PPP1R7Q15435 360 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TAF1BQ53T94 588 aaPredicted RBP14.4□□□□□ -0.1
SS18-212ENST00000579061 KIAA1614Q5VZ46 1190 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 PTRHD1Q6GMV3 140 aaKnown RBP14.4□□□□□ -0.1
SS18-212ENST00000579061 CASC4Q6P4E1 433 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 PCSK4Q6UW60 755 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 CES3Q6UWW8 571 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 NAPRTQ6XQN6 538 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TMEM135Q86UB9 458 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 PPIL6Q8IXY8 311 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 ADGRF3Q8IZF5 1079 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 OTUD6BQ8N6M0 293 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 LKAAEAR1Q8TD35 194 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 KIAA1143Q96AT1 154 aaPredicted RBP14.4□□□□□ -0.1
SS18-212ENST00000579061 SLC45A3Q96JT2 553 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 RUNDC3BQ96NL0 473 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TUBB2BQ9BVA1 445 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 PITPNM3Q9BZ71 974 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 TWSG1Q9GZX9 223 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 FGF21Q9NSA1 209 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 OR6C2Q9NZP2 312 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 ICKQ9UPZ9 632 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 VPS9D1Q9Y2B5 631 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 COL6A6A6NMZ7 2263 aa14.4□□□□□ -0.1
SS18-212ENST00000579061 SNRNP200O75643 2136 aaKnown RBP14.39□□□□□ -0.11
SS18-212ENST00000579061 SEC16AO15027 2179 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 LOC101059948A0A1B0GTJ6 334 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 GSAPA4D1B5 854 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 IQCF5A8MTL0 148 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 H3BMM5 538 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 KIAA0754O94854 1291 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 EBLN1P0CF75 366 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 ZNF28P17035 718 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 ITGB6P18564 788 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 STAT5AP42229 794 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 HSPA14Q0VDF9 509 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 PTK6Q13882 451 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 KCTD19Q17RG1 926 aaPredicted RBP14.39□□□□□ -0.11
SS18-212ENST00000579061 ANKRD20A4Q4UJ75 823 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 PLEKHS1Q5SXH7 462 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 C6orf15Q6UXA7 325 aaPredicted RBP14.39□□□□□ -0.11
SS18-212ENST00000579061 UNC5DQ6UXZ4 953 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 PCGF5Q86SE9 256 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 LMNTD2Q8IXW0 634 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 KRT222Q8N1A0 295 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 LPGAT1Q92604 370 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 NAPGQ99747 312 aaPredicted RBP14.39□□□□□ -0.11
SS18-212ENST00000579061 SLC12A9Q9BXP2 914 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 DDX47Q9H0S4 455 aaKnown RBP14.39□□□□□ -0.11
SS18-212ENST00000579061 GPN2Q9H9Y4 310 aaPredicted RBP14.39□□□□□ -0.11
SS18-212ENST00000579061 LATS2Q9NRM7 1088 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 PYCARDQ9ULZ3 195 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 MRFAP1Q9Y605 127 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 SAR1BQ9Y6B6 198 aa14.39□□□□□ -0.11
SS18-212ENST00000579061 PIPSLA2A3N6 862 aa14.38□□□□□ -0.11
SS18-212ENST00000579061 ZNF891A8MT65 544 aaPredicted RBP14.38□□□□□ -0.11
SS18-212ENST00000579061 GOLGA8MH3BSY2 632 aa14.38□□□□□ -0.11
SS18-212ENST00000579061 DNALI1O14645 258 aaPredicted RBP14.38□□□□□ -0.11
SS18-212ENST00000579061 MAP3K7O43318 606 aa14.38□□□□□ -0.11
SS18-212ENST00000579061 USP1O94782 785 aa14.38□□□□□ -0.11
SS18-212ENST00000579061 ESR1P03372 595 aa14.38□□□□□ -0.11
SS18-212ENST00000579061 TPBGLP0DKB5 382 aa14.38□□□□□ -0.11
SS18-212ENST00000579061 CSE1LP55060 971 aaKnown RBP14.38□□□□□ -0.11
SS18-212ENST00000579061 EIF3BP55884 814 aaKnown RBP14.38□□□□□ -0.11
SS18-212ENST00000579061 DHX34Q14147 1143 aaKnown RBP14.38□□□□□ -0.11
SS18-212ENST00000579061 KCNAB1Q14722 419 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms