RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 NTNG1Q9Y2I2 539 aa3.88□□□□□ -1.79
PTPRM-206ENST00000578093 TRAF6Q9Y4K3 522 aa3.88□□□□□ -1.79
PTPRM-206ENST00000578093 ATP6V1DQ9Y5K8 247 aa3.88□□□□□ -1.79
PTPRM-206ENST00000578093 SLC30A1Q9Y6M5 507 aa3.88□□□□□ -1.79
PTPRM-206ENST00000578093 X6R8D5 127 aa3.88□□□□□ -1.79
PTPRM-206ENST00000578093 ZGRF1Q86YA3 2104 aa3.88□□□□□ -1.79
PTPRM-206ENST00000578093 A0A0J9YYE9 177 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PIPSLA2A3N6 862 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SIGLEC16A6NMB1 481 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PES1O00541 588 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PPP1R12AO14974 1030 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 MAFKO60675 156 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SPAG6O75602 509 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 FGFR1OPO95684 399 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 TRBC1P01850 177 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 MSL3P1P0C860 447 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 EBLN1P0CF75 366 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CYP2A6P11509 494 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 FGF5P12034 268 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 F3P13726 295 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 BRAFP15056 766 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 FOLR1P15328 257 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 IL1R2P27930 398 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 HNRNPH3P31942 346 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CASP14P31944 242 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 MAN1A1P33908 653 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SOX5P35711 763 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 GARSP41250 739 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 NSFP46459 744 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CAPZBP47756 277 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PGDP52209 483 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 STC1P52823 247 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ERVFRD-1P60508 538 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 POLR2FP61218 127 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 POLR2LP62875 67 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 NSUN2Q08J23 767 aaKnown RBP eCLIP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 RAPSNQ13702 412 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 DPYSQ14117 519 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ZNF235Q14590 738 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 KIR3DS1Q14943 382 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SEPT7Q16181 437 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 UGT8Q16880 541 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 KHDC1Q4VXA5 237 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PPP6R3Q5H9R7 873 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 HENMT1Q5T8I9 393 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ARMC12Q5T9G4 340 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PRAMEF17Q5VTA0 474 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PAPD7Q5XG87 772 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 LCN10Q6JVE6 187 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PWWP2BQ6NUJ5 590 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 JMJD6Q6NYC1 403 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 IYDQ6PHW0 289 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PAQR3Q6TCH7 311 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 FAM92BQ6ZTR7 304 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 RFX8Q6ZV50 586 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 RASGRP3Q8IV61 690 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 TMEM151BQ8IW70 566 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 Q8N1Y9 231 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 FDCSPQ8NFU4 85 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ADAMTS17Q8TE56 1095 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 INPP5DQ92835 1189 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SCRN2Q96FV2 425 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 NUDCD1Q96RS6 583 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CNPY3Q9BT09 278 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SYT11Q9BT88 431 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SLC25A23Q9BV35 468 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 TNFRSF12AQ9NP84 129 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 NT5MQ9NPB1 228 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 LHX9Q9NQ69 397 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 FAM207AQ9NSI2 230 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SEPT11Q9NVA2 429 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 TMEM51Q9NW97 253 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CWC15Q9P013 229 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ZNF624Q9P2J8 865 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ATXN10Q9UBB4 475 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CPNE7Q9UBL6 633 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CNOT8Q9UFF9 292 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SLC23A2Q9UGH3 650 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PCSK1NQ9UHG2 260 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 ZNHIT2Q9UHR6 403 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PHTF1Q9UMS5 762 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SIK3Q9Y2K2 1263 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PPIL1Q9Y3C6 166 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PCDHGA9Q9Y5G4 932 aaKnown RBP3.87□□□□□ -1.79
PTPRM-206ENST00000578093 PCDHGA6Q9Y5G7 932 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 SVILO95425 2214 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 MED13LQ71F56 2210 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 POLEQ07864 2286 aa3.87□□□□□ -1.79
PTPRM-206ENST00000578093 CCDC168Q8NDH2 2452 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 IGHV5-51A0A0C4DH38 117 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 KIR2DS5A0A0G2JLQ3 304 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 A0A0G2JNG1 304 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 OR52A4PA6NMU1 304 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 NUDT19A8MXV4 375 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 TMCO5BA8MYB1 307 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 KIR2DS3K7RE56 304 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 MASP2O00187 686 aa3.86□□□□□ -1.79
PTPRM-206ENST00000578093 HRKO00198 91 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms