RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ACSL4O60488 711 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 CLDN11O75508 207 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 TIGD6Q17RP2 521 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 CES5AQ6NT32 575 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PGM2L1Q6PCE3 622 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 OR5K1Q8NHB7 308 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 OSBPL2Q9H1P3 480 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 AASDHPPTQ9NRN7 309 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 GSTK1Q9Y2Q3 226 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PRSS55Q6UWB4 352 aaPredicted RBP17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 LYSMD3Q7Z3D4 306 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 FGD2Q7Z6J4 655 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 TRPV5Q9NQA5 729 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 PTGFRNQ9P2B2 879 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 HOXD10P28358 340 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 KRTCAP2Q8N6L1 136 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 KCTD13Q8WZ19 329 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 C3orf30Q96M34 536 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 VRTNQ9H8Y1 702 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 GDAP2Q9NXN4 497 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 ABCB7O75027 752 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 IL1BP01584 269 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 GTF2E2P29084 291 aaKnown RBP17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 HCAR3P49019 387 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 PDPRQ8NCN5 879 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 FLCNQ8NFG4 579 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 TMEM40Q8WWA1 233 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 PPCDCQ96CD2 204 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 NUDT4Q9NZJ9 180 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 RNF11Q9Y3C5 154 aa17.56■□□□□ 0.4
ATPAF1-214ENST00000576409 MAGEB17A8MXT2 336 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 CLIC1O00299 241 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 CASKO14936 926 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 ESR1P03372 595 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 GKP32189 559 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 ATP12AP54707 1039 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 SNRPD1P62314 119 aaKnown RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 C2orf80Q0P641 193 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 ANKDD1AQ495B1 522 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 CYS1Q717R9 158 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 SACM1LQ9NTJ5 587 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 CREG1O75629 220 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 CHRM1P11229 460 aaPredicted RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 HOXA11P31270 313 aaPredicted RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 SKIV2LQ15477 1246 aaKnown RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 NOL9Q5SY16 702 aaKnown RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 C6orf141Q5SZD1 244 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 OR5AK3PQ8NH89 298 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 RHBGQ9H310 441 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 DNAJC11Q9NVH1 559 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 AHSPQ9NZD4 102 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 RIMS3Q9UJD0 308 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 ZNF222Q9UK12 451 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 ACTL7AQ9Y615 435 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 HAT1O14929 419 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 PSMA1P25786 263 aaKnown RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 PRDX3P30048 256 aaKnown RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 PABPC1LQ4VXU2 614 aaKnown RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 ISCA2Q86U28 154 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 PTBP2Q9UKA9 531 aaKnown RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 PHF24Q9UPV7 400 aa17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 RP1L1Q8IWN7 2480 aaPredicted RBP17.55■□□□□ 0.4
ATPAF1-214ENST00000576409 NR2F6P10588 404 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 ELNP15502 786 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 OGNP20774 298 aaKnown RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 RFC2P35250 354 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 BMXP51813 675 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 STC1P52823 247 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 RPL26P61254 145 aaKnown RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 OR4D1Q15615 310 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 PAGE3Q5JUK9 113 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 SYVN1Q86TM6 617 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 C11orf65Q8NCR3 313 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 FAM110BQ8TC76 370 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 GAB3Q8WWW8 586 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 TRIM63Q969Q1 353 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 NUSAP1Q9BXS6 441 aaKnown RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 CMTM6Q9NX76 183 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 ITGB1BP2Q9UKP3 347 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 A0A0G2JLL6 359 aaPredicted RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 S1PR4O95977 384 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 CKBP12277 381 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 GRIA2P42262 883 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 PTGER3P43115 390 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 MAGEA10P43363 369 aaPredicted RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 HTR6P50406 440 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 AFF1P51825 1210 aaKnown RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 MANFP55145 182 aaKnown RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 CACNG1Q06432 222 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 C18orf21Q32NC0 220 aaPredicted RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 TRIM40Q6P9F5 258 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 TMPRSS11AQ6ZMR5 421 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 PRRT2Q7Z6L0 340 aaPredicted RBP17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 EQTNQ9NQ60 294 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 ERVK-18Q9QC07 812 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 A0A0G2JN53 185 aa17.54■□□□□ 0.4
ATPAF1-214ENST00000576409 ENGP17813 658 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms