RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 VN1R5Q7Z5H4 357 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 CEP97Q8IW35 865 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PPCDCQ96CD2 204 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PYURFQ96I23 114 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 RAI2Q9Y5P3 530 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 SERPINB7O75635 380 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 IFNW1P05000 195 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 ALDH2P05091 517 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 RPLP2P05387 115 aaKnown RBP12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 CD72P21854 359 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 ALDH7A1P49419 539 aaKnown RBP12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 SMARCB1Q12824 385 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 LAPTM4AQ15012 233 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF181Q2M3W8 571 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 HKDC1Q2TB90 917 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 NDUFAF6Q330K2 333 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 ERAP2Q6P179 960 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 USP45Q70EL2 814 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 MRPS31Q92665 395 aaKnown RBP12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 C2orf49Q9BVC5 232 aaPredicted RBP12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 OCEL1Q9H607 264 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 CAPN10Q9HC96 672 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 ERVK-18Q9QC07 812 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 FKBPLQ9UIM3 349 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 KCNE2Q9Y6J6 123 aa12.9□□□□□ -0.35
PCDHGB3-201ENST00000576222 IRGMA1A4Y4 181 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 A8MV72 311 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 KPNA5O15131 536 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 DYRK3O43781 588 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 CCNB2O95067 398 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 HPRP00739 348 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 GNAO1P09471 354 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 PPP5CP53041 499 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 IFI44LQ53G44 452 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 MACC1Q6ZN28 852 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR8H3Q8N146 312 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 EFHD2Q96C19 240 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 TMEM246Q9BRR3 403 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 NECTIN3Q9NQS3 549 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 DNAJC11Q9NVH1 559 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 MALT1Q9UDY8 824 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 KCNH4Q9UQ05 1017 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 C7orf72A4D263 438 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 CDC7O00311 574 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 CDK14O94921 469 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 DIRAS1O95057 198 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 C22orf31O95567 290 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 PCSK2P16519 638 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 EFNA1P20827 205 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 ASMTP46597 345 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 RPIAP49247 311 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 CRYBB1P53674 252 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 GCNT6Q5T4J0 391 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC7A5P1Q8MH63 180 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR10G2Q8NGC3 310 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 ADAM2Q99965 735 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 CIPCQ9C0C6 399 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAF1Q9H063 256 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 MBD2Q9UBB5 411 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 COMMD3Q9UBI1 195 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 SOWAHBA6NEL2 793 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 ENPP3O14638 875 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 BCAS1O75363 584 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 C1RP00736 705 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 PLA2G16P53816 162 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 SNAPC1Q16533 368 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 PPTC7Q8NI37 304 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 CLP1Q92989 425 aaKnown RBP12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 COL21A1Q96P44 957 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF607Q96SK3 696 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 SPATA5L1Q9BVQ7 753 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR2B2Q9GZK3 357 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 DNMT3LQ9UJW3 386 aa12.89□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRAMEF33A0A0G2JMD5 474 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 AP1G1O43747 822 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PEX10O60683 326 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRAMEF10O60809 474 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PGK1P00558 417 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 MYCP01106 439 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PCSK6P29122 969 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PTGER3P43115 390 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 SRSF11Q05519 484 aaKnown RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CACNG1Q06432 222 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 TEAD4Q15561 434 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CRTC2Q53ET0 693 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRR23CQ6ZRP0 262 aa12.88□□□□□ -0.35
PCDHGB3-201ENST00000576222 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms