RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 GPN3Q9UHW5 284 aaPredicted RBP9.64□□□□□ -0.87
CALCOCO2-227ENST00000575560 LCMT1Q9UIC8 334 aa9.64□□□□□ -0.87
CALCOCO2-227ENST00000575560 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
CALCOCO2-227ENST00000575560 CDYLQ9Y232 598 aa9.64□□□□□ -0.87
CALCOCO2-227ENST00000575560 PKP3Q9Y446 797 aa9.64□□□□□ -0.87
CALCOCO2-227ENST00000575560 A0A1B0GUH1 482 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 C17orf113A0A1B0GUU1 675 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 CCDC66A2RUB6 948 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 LRRD1A4D1F6 860 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 C2orf74A8MZ97 194 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 PRSS44E7EML9 344 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 PRAMEF1O95521 474 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 CTSBP07858 339 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZFXP17010 805 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 CD151P48509 253 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 NFKBIBQ15653 356 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZIC1Q15915 447 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 NKAIN1Q4KMZ8 207 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 C1orf189Q5VU69 101 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 B3GNTL1Q67FW5 361 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 AMIGO1Q86WK6 493 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 PHC3Q8NDX5 983 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 OR52E1Q8NGJ3 308 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 DNAJB14Q8TBM8 379 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 HM13Q8TCT9 377 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 BLOC1S5Q8TDH9 187 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 RELTQ969Z4 430 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 OXNAD1Q96HP4 312 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 SLX1AQ9BQ83 275 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 AP1M1Q9BXS5 423 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 OR52A5Q9H2C5 316 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 RUBCNLQ9H714 662 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 MVB12BQ9H7P6 319 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 SLC22A11Q9NSA0 550 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 ACTR10Q9NZ32 417 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 IFT80Q9P2H3 777 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 FER1L5A0AVI2 2057 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 CCDC88CQ9P219 2028 aa9.63□□□□□ -0.87
CALCOCO2-227ENST00000575560 CNTRLQ7Z7A1 2325 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 SMTNL1A8MU46 457 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 STX7O15400 261 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 SRP72O76094 671 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 H2AFZP0C0S5 128 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 NFKB1P19838 968 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 MMP11P24347 488 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 PBX1P40424 430 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 NR2C2P49116 596 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 PRLHRP49683 370 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 XIAPP98170 497 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 TYRO3Q06418 890 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 ART3Q13508 389 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 BOP1Q14137 746 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZNF169Q14929 603 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 CYP2A13Q16696 494 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 AGAP7PQ5VUJ5 663 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 PRAMEF13Q5VWM6 474 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 TLDC1Q6P9B6 456 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 SARM1Q6SZW1 724 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 SPESP1Q6UW49 350 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 H2AFVQ71UI9 128 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 FJX1Q86VR8 437 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 C19orf47Q8N9M1 422 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 FLVCR1-AS1Q8TAF5 88 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 RBM41Q96IZ5 413 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 AGAP4Q96P64 663 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 FCRL5Q96RD9 977 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 NAT10Q9H0A0 1025 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 XKR8Q9H6D3 395 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 ASB8Q9H765 288 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 SLC6A20Q9NP91 592 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 SAE1Q9UBE0 346 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 COPG2Q9UBF2 871 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 DHCR7Q9UBM7 475 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 NDOR1Q9UHB4 597 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 KLF2Q9Y5W3 355 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 ARL5AQ9Y689 179 aa9.62□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZGRF1Q86YA3 2104 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 ANKRD12Q6UB98 2062 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 CCDC78A2IDD5 438 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 SOCS6O14544 535 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZSCAN9O15535 394 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 ONECUT2O95948 504 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 ATP1B2P14415 290 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 PDHA2P29803 388 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 TNNT3P45378 269 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 GCGRP47871 477 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 DYNLT1P63172 113 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZBED6P86452 979 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 CDC16Q13042 620 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 PRKG2Q13237 762 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 MPP3Q13368 585 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 MESDQ14696 234 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 SLC9A5Q14940 896 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 TLR1Q15399 786 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 TAF1AQ15573 450 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZXDCQ2QGD7 858 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 LRRC38Q5VT99 294 aa9.61□□□□□ -0.87
CALCOCO2-227ENST00000575560 ZNF324BQ6AW86 544 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms