RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 FJX1Q86VR8 437 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 PLD5Q8N7P1 536 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 HM13Q8TCT9 377 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 BLOC1S5Q8TDH9 187 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 CPLX3Q8WVH0 158 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 RAPGEF5Q92565 580 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 RBM41Q96IZ5 413 aaKnown RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 CNDP1Q96KN2 507 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 LURAP1Q96LR2 239 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 RMDN2Q96LZ7 410 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 TEKT5Q96M29 485 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 OLFM3Q96PB7 478 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 SLX1AQ9BQ83 275 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 NDC1Q9BTX1 674 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 VPS37BQ9H9H4 285 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 MRM3Q9HC36 420 aaKnown RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 ZBTB20Q9HC78 741 aaPredicted RBP8.7□□□□□ -1.02
SMG6-218ENST00000575454 OLAHQ9NV23 265 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 ACTR10Q9NZ32 417 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 CTTNBP2NLQ9P2B4 639 aa8.7□□□□□ -1.02
SMG6-218ENST00000575454 LRRD1A4D1F6 860 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 C2orf81A6NN90 581 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 BTN3A1O00481 513 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 JRKO75564 520 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 PRAMEF1O95521 474 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 ALBP02768 609 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 SERPING1P05155 500 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 UMODP07911 640 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 GSTM1P09488 218 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 NR2C2P49116 596 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 GSTM4Q03013 218 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 RPA4Q13156 261 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 INAQ16352 499 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 ODF2Q5BJF6 829 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 FIGNQ5HY92 759 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 SIRPB2Q5JXA9 342 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 SPESP1Q6UW49 350 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 C19orf47Q8N9M1 422 aaKnown RBP8.69□□□□□ -1.02
SMG6-218ENST00000575454 DLG3Q92796 817 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 FKBP10Q96AY3 582 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 ULK4Q96C45 1275 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 LMF1Q96S06 567 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 LHPPQ9H008 270 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 HSD3B7Q9H2F3 369 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 ASB8Q9H765 288 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 WDR54Q9H977 334 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 IRAK4Q9NWZ3 460 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 UBP1Q9NZI7 540 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 FAM8A1Q9UBU6 413 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 CDC23Q9UJX2 597 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 FBXL4Q9UKA2 621 aa8.69□□□□□ -1.02
SMG6-218ENST00000575454 NXT1Q9UKK6 140 aaKnown RBP8.69□□□□□ -1.02
SMG6-218ENST00000575454 PCNX1Q96RV3 2341 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 SMTNL1A8MU46 457 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 H3BMH7 237 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 GAPDHSO14556 408 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 GPR39O43194 453 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 KDM1AO60341 852 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 SRP72O76094 671 aaKnown RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 H2AFZP0C0S5 128 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 PVRP15151 417 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 CAPN3P20807 821 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ALAS2P22557 587 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 PTPN3P26045 913 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 HTR1EP28566 365 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 SSTR2P30874 369 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 SHMT2P34897 504 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ARSFP54793 590 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 TAS2R40P59535 323 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 MPP3Q13368 585 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 PRKD1Q15139 912 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 SLC1A5Q15758 541 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 SLC5A12Q1EHB4 618 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ZNF630Q2M218 657 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 KDELC1Q6UW63 502 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ISLR2Q6UXK2 745 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 BNC2Q6ZN30 1099 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 H2AFVQ71UI9 128 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ADGRF3Q8IZF5 1079 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 NXPE1Q8N323 547 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ZNF808Q8N4W9 903 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 SLC25A41Q8N5S1 370 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ZNF655Q8N720 491 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 OR52E1Q8NGJ3 308 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 TFB1MQ8WVM0 346 aaKnown RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 CTNNBL1Q8WYA6 563 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 IQCDQ96DY2 449 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 FCRL5Q96RD9 977 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 VAT1Q99536 393 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 COPS8Q99627 209 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 ANP32EQ9BTT0 268 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 FSD1LQ9BXM9 530 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 SPRTNQ9H040 489 aaPredicted RBP8.68□□□□□ -1.02
SMG6-218ENST00000575454 KLHL25Q9H0H3 589 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 IL1RAPL1Q9NZN1 696 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 OR6C2Q9NZP2 312 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
SMG6-218ENST00000575454 CDYLQ9Y232 598 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms