RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ABCG1P45844 678 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 ITGA8P53708 1063 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 MAPK10P53779 464 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 DR1Q01658 176 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 C2orf54Q08AI8 447 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 ABRQ12979 859 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 DHX34Q14147 1143 aaKnown RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 KCNAB1Q14722 419 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 MORF4L2Q15014 288 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 TRADDQ15628 312 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 ZIC1Q15915 447 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 AARS2Q5JTZ9 985 aaKnown RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 SNAP47Q5SQN1 464 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 UBAP2Q5T6F2 1119 aaKnown RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 ZNF470Q6ECI4 717 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 TRMT10BQ6PF06 316 aaKnown RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 FOXR1Q6PIV2 292 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 ZDHHC24Q6UX98 284 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 SYT10Q6XYQ8 523 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 FAM92BQ6ZTR7 304 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 SYDE1Q6ZW31 735 aaPredicted RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 PLXDC1Q8IUK5 500 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 D2HGDHQ8N465 521 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 PHC3Q8NDX5 983 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 HNRNPLLQ8WVV9 542 aaKnown RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 KCNE4Q8WWG9 221 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 SEC14L1Q92503 715 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 TFGQ92734 400 aaPredicted RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 NKD1Q969G9 470 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 NAF1Q96HR8 494 aaKnown RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 EBNA1BP2Q99848 306 aaKnown RBP8.42□□□□□ -1.06
SMG6-216ENST00000575176 CTRCQ99895 268 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 DPH1Q9BZG8 443 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 XKR8Q9H6D3 395 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 MVB12BQ9H7P6 319 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 CPNE5Q9HCH3 593 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 FBXO8Q9NRD0 319 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 KLHL3Q9UH77 587 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 ASIC3Q9UHC3 531 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 RPS6KL1Q9Y6S9 549 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 FAM169AQ9Y6X4 670 aa8.42□□□□□ -1.06
SMG6-216ENST00000575176 FLNCQ14315 2725 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 SEC16AO15027 2179 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 A0A1W2PPV9 198 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 OR6C74A6NCV1 312 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 K7ENP7 123 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 NRP2O60462 931 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 WISP3O95389 354 aaPredicted RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 MATN4O95460 622 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 TSPAN12O95859 305 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 ESR1P03372 595 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 CTSBP07858 339 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 OR56A5P0C7T3 313 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 MSL3P1P0C860 447 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 EBLN1P0CF75 366 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 FGF5P12034 268 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 ST6GAL1P15907 406 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 PGAM1P18669 254 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 RBMS1P29558 406 aaKnown RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 ATP5DP30049 168 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 EIF3BP55884 814 aaKnown RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 CTBP1Q13363 440 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 FRG1Q14331 258 aaKnown RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 BRD3Q15059 726 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 PPP1R7Q15435 360 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 KYNUQ16719 465 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 DUPD1Q68J44 220 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 NEPROQ6NW34 567 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 INO80CQ6PI98 192 aaPredicted RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 ZNF517Q6ZMY9 492 aaPredicted RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 UNC5AQ6ZN44 842 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 VASH2Q86V25 355 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 LRRC6Q86X45 466 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 TBC1D21Q8IYX1 336 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 CARFQ8N187 725 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 CD200R1Q8TD46 325 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 TTC9Q92623 222 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMG6-216ENST00000575176 ZNF501Q96CX3 271 aaPredicted RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 RNF31Q96EP0 1072 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 STAMBPL1Q96FJ0 436 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 AHCYL2Q96HN2 611 aaKnown RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 OR2A14Q96R47 310 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 TAAR9Q96RI9 348 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 TCF12Q99081 682 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 KRT12Q99456 494 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 CD180Q99467 661 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 VPS37BQ9H9H4 285 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 FBXO6Q9NRD1 293 aaPredicted RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 SMYD2Q9NRG4 433 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 ENAMQ9NRM1 1142 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 INTS10Q9NVR2 710 aaKnown RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 RNF14Q9UBS8 474 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 GNPTGQ9UJJ9 305 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 PLAGL1Q9UM63 463 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 LHX6Q9UPM6 363 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 HEBP2Q9Y5Z4 205 aa8.41□□□□□ -1.06
SMG6-216ENST00000575176 PSAT1Q9Y617 370 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms