RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SLC29A1Q99808 456 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 P2RY13Q9BPV8 354 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 MARK1Q9P0L2 795 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 IL36AQ9UHA7 158 aa23.14■■□□□ 1.29
NPLOC4-217ENST00000574897 C7orf72A4D263 438 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 ULK1O75385 1050 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 GGT5P36269 586 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 RALGPS2Q86X27 583 aaPredicted RBP23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 ASB11Q8WXH4 323 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 FOXJ1Q92949 421 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 C15orf38-AP3S2A0A0A6YYH1 394 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 FAM149AA5PLN7 773 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 EBLN1P0CF75 366 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 CYP2A6P11509 494 aaPredicted RBP23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 CKMT2P17540 419 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 HOXA9P31269 272 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 GRIN2CQ14957 1233 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 LCN8Q6JVE9 175 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 DLEU7Q6UYE1 221 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 ARPINQ7Z6K5 226 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 CLHC1Q8NHS4 586 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 ELMO1Q92556 727 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 PPP3R2Q96LZ3 170 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 KCTD14Q9BQ13 255 aaPredicted RBP23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 SLC32A1Q9H598 525 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 ACTR8Q9H981 624 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 PARVBQ9HBI1 364 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 ACTR3BQ9P1U1 418 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 CIDEBQ9UHD4 219 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 TRPS1Q9UHF7 1281 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 ATG2AQ2TAZ0 1938 aa23.13■■□□□ 1.29
NPLOC4-217ENST00000574897 GRXCR1A8MXD5 290 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 AKAP10O43572 662 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 DENRO43583 198 aaKnown RBP23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 NUAK1O60285 661 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 CISD3P0C7P0 127 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 ZNF30P17039 623 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 NNMTP40261 264 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 DGKGP49619 791 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 NEK2P51955 445 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 MTPNP58546 118 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 BNIP2Q12982 314 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 ZDHHC20Q5W0Z9 365 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 NEK5Q6P3R8 708 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 SUSD1Q6UWL2 747 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 LILRA3Q8N6C8 439 aaPredicted RBP23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 UHRF1Q96T88 793 aaPredicted RBP23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 SLC12A9Q9BXP2 914 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 YIPF3Q9GZM5 350 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 UNC80Q8N2C7 3258 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 DHRS12A0PJE2 317 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 RGS14O43566 566 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 WDR47O94967 919 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 PTCHD3Q3KNS1 767 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 TBCELQ5QJ74 424 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 ADGRD2Q7Z7M1 963 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 PLPP6Q8IY26 295 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 LIX1Q8N485 282 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 KRTCAP2Q8N6L1 136 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 ERLEC1Q96DZ1 483 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 ATG10Q9H0Y0 220 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 GEMIN8Q9NWZ8 242 aaKnown RBP23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 DUS2Q9NX74 493 aaKnown RBP23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 NEUROG3Q9Y4Z2 214 aa23.12■■□□□ 1.29
NPLOC4-217ENST00000574897 NUP214P35658 2090 aaPredicted RBP23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 A0A1W2PQ67 120 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 C16orf96A6NNT2 1141 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 PRAMEF4O60810 478 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 SEC22BO75396 215 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 HNRNPA1P09651 372 aaKnown RBP eCLIP23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 VARSP26640 1264 aaKnown RBP23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 GRIA2P42262 883 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 KIAA0040Q15053 153 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 IMPG1Q17R60 797 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 HENMT1Q5T8I9 393 aaKnown RBP23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 PRAMEF9Q5VWM5 478 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 MARVELD2Q8N4S9 558 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 NXPE3Q969Y0 559 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 TMEM106CQ9BVX2 250 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 ACPTQ9BZG2 426 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 CCM2LQ9NUG4 571 aaPredicted RBP23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 KLHL42Q9P2K6 505 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 RAB26Q9ULW5 256 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 MYOCOSA0A1B0GUC4 107 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 INPP4BO15327 924 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 CLDN9O95484 217 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 PDYNP01213 254 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 ADH5P11766 374 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 EN2P19622 333 aaPredicted RBP23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 ITPKAP23677 461 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 OR4D2P58180 307 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 ZNF805Q5CZA5 627 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 PARS2Q7L3T8 475 aaKnown RBP23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 TRIM46Q7Z4K8 759 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 SFTPA1Q8IWL2 248 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 USP7Q93009 1102 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 SMOXQ9NWM0 555 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 FBXO10Q9UK96 956 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 V9GYQ6 96 aa23.11■■□□□ 1.29
NPLOC4-217ENST00000574897 OTOL1A6NHN0 477 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms