RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 NARSO43776 548 aaKnown RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 KATNA1O75449 491 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 CAPN1P07384 714 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 EBLN1P0CF75 366 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 GPX3P22352 226 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 CCND1P24385 295 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 NTSR1P30989 418 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 GDF5P43026 501 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 RPS14P62263 151 aaKnown RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 GRB7Q14451 532 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 MBOAT1Q6ZNC8 495 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 NET1Q7Z628 596 aaPredicted RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 SKA2Q8WVK7 121 aaPredicted RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 CDK15Q96Q40 435 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 TRPS1Q9UHF7 1281 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 C17orf113A0A1B0GUU1 675 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 LIN7AO14910 233 aaPredicted RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 HGFP14210 728 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 CCR3P51677 355 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 STX1BP61266 288 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 ZXDCQ2QGD7 858 aaPredicted RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 SYTL3Q4VX76 610 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 C16orf89Q6UX73 402 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 RALGPS2Q86X27 583 aaPredicted RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 FBXL8Q96CD0 374 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 HIC2Q96JB3 615 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 SDR39U1Q9NRG7 319 aaPredicted RBP27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 GULP1Q9UBP9 304 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 SLC7A8Q9UHI5 535 aa27.78■■■□□ 2.04
CTDNEP1-210ENST00000574322 PABPN1LA6NDY0 278 aaKnown RBP27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 WDR47O94967 919 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 C7P10643 843 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 SRFP11831 508 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 TEAD1P28347 426 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 STX5Q13190 355 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 DEFB107AQ8IZN7 70 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 OR2AG1Q9H205 316 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 CD320Q9NPF0 282 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 ATXN10Q9UBB4 475 aa27.77■■■□□ 2.04
CTDNEP1-210ENST00000574322 AIM2O14862 343 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 PEX11AO75192 247 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 IDO1P14902 403 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 SEC13P55735 322 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 AGKQ53H12 422 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 PNCKQ6P2M8 343 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 DSELQ8IZU8 1212 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 HDDC3Q8N4P3 179 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 RCN3Q96D15 328 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 TMEM45AQ9NWC5 275 aa27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 PRPF19Q9UMS4 504 aaKnown RBP27.76■■■□□ 2.03
CTDNEP1-210ENST00000574322 NUDT2P50583 147 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 PLOD1Q02809 727 aaPredicted RBP27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 GTF2H3Q13889 308 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 TRMT5Q32P41 509 aaKnown RBP27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 TMEM196Q5HYL7 178 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 SDE2Q6IQ49 451 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 GK5Q6ZS86 529 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 Q6ZSR9 355 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 FBXO15Q8NCQ5 510 aaPredicted RBP27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 OR2T11Q8NH01 316 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 WDR60Q8WVS4 1066 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 CLPTM1LQ96KA5 538 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 SLC25A23Q9BV35 468 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 SLC29A3Q9BZD2 475 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 C8orf33Q9H7E9 229 aaPredicted RBP27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 DUSP12Q9UNI6 340 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 IGLON5A6NGN9 336 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 SNRPB2P08579 225 aaKnown RBP27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 EPORP19235 508 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 TRIM74Q86UV6 250 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 KLHDC8AQ8IYD2 350 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 MIER2Q8N344 545 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 DCBLD1Q8N8Z6 715 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 IL17RCQ8NAC3 791 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 DNASE1L2Q92874 299 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 ERLEC1Q96DZ1 483 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 UHRF1Q96T88 793 aaPredicted RBP27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 SLC2A4RGQ9NR83 387 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 GIMAP2Q9UG22 337 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 GPR45Q9Y5Y3 372 aa27.75■■■□□ 2.03
CTDNEP1-210ENST00000574322 ARHGEF33A8MVX0 844 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 ENTPD5O75356 428 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 CIB2O75838 187 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 LMNAP02545 664 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 HMOX2P30519 316 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 ERVK-8P63133 956 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 STARD3Q14849 445 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 KPNB1Q14974 876 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 GGTA1PQ4G0N0 100 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 TCHHL1Q5QJ38 904 aaPredicted RBP27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 KIAA1211LQ6NV74 962 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 FUNDC1Q8IVP5 155 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 ZNF547Q8IVP9 402 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 PGAM4Q8N0Y7 254 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 ENDOVQ8N8Q3 282 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 PLA2G15Q8NCC3 412 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 CFAP61Q8NHU2 1237 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 CCDC167Q9P0B6 97 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 SERGEFQ9UGK8 458 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms