RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 POLR2IP36954 125 aaKnown RBP22.31■■□□□ 1.16
VPS53-211ENST00000571805 STT3AP46977 705 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 RUNDC3AQ59EK9 446 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 RETSATQ6NUM9 610 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 RAET1EQ8TD07 263 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 COG8Q96MW5 612 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 HTATIP2Q9BUP3 242 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 LRTM1Q9HBL6 345 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 ADGRE2Q9UHX3 823 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 CRLS1Q9UJA2 301 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 SEC22BO75396 215 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 SGO1Q5FBB7 561 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 GPR107Q5VW38 600 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 MBOAT1Q6ZNC8 495 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 ZSWIM9Q86XI8 627 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 ADGRG2Q8IZP9 1017 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 FBXO30Q8TB52 745 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 PNPT1Q8TCS8 783 aaKnown RBP22.31■■□□□ 1.16
VPS53-211ENST00000571805 CD99L2Q8TCZ2 262 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 SCLYQ96I15 445 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 C2orf49Q9BVC5 232 aaPredicted RBP22.31■■□□□ 1.16
VPS53-211ENST00000571805 LATS2Q9NRM7 1088 aa22.31■■□□□ 1.16
VPS53-211ENST00000571805 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.31■■□□□ 1.16
VPS53-211ENST00000571805 A0A0J9YVX5 310 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 PITPNM1O00562 1244 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 GSTA4O15217 222 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 ZNF821O75541 412 aaPredicted RBP22.3■■□□□ 1.16
VPS53-211ENST00000571805 INHAP05111 366 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 CSNK1DP48730 415 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 VEPH1Q14D04 833 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 GPR33Q49SQ1 333 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 USP39Q53GS9 565 aaKnown RBP22.3■■□□□ 1.16
VPS53-211ENST00000571805 CACHD1Q5VU97 1274 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 FAM217AQ8IXS0 508 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 NXPE1Q8N323 547 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 ARL14EPQ8N8R7 260 aaPredicted RBP22.3■■□□□ 1.16
VPS53-211ENST00000571805 OR52E4Q8NGH9 312 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 PXYLP1Q8TE99 480 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 OSBPL6Q9BZF3 934 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 DNAJB9Q9UBS3 223 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 CIDEBQ9UHD4 219 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 TRBV5-3A0A0A0MS03 114 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 TRIM64BA6NI03 449 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 AGAP14A8MT82 685 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 A8MX80 341 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 TMX2-CTNND1H3BSU7 103 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 AREL1O15033 823 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 B4GAT1O43505 415 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 HPRP00739 348 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 EPB42P16452 691 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 CLEC4FQ8N1N0 589 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 CBARPQ8N350 705 aaPredicted RBP22.3■■□□□ 1.16
VPS53-211ENST00000571805 GFM2Q969S9 779 aaKnown RBP22.3■■□□□ 1.16
VPS53-211ENST00000571805 DCUN1D5Q9BTE7 237 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 ZNF334Q9HCZ1 680 aaPredicted RBP22.3■■□□□ 1.16
VPS53-211ENST00000571805 LIMD1Q9UGP4 676 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 UTS2RQ9UKP6 389 aa22.3■■□□□ 1.16
VPS53-211ENST00000571805 ELOVL7A1L3X0 281 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 SOCS5O75159 536 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 CPNE6O95741 557 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 HOXD10P28358 340 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 SPAM1P38567 509 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 IST1P53990 364 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 ZNF773Q6PK81 442 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 TSPAN33Q86UF1 283 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 ZDHHC13Q8IUH4 622 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 VOPP1Q96AW1 172 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 TUBA1CQ9BQE3 449 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 SLC6A13Q9NSD5 602 aa22.29■■□□□ 1.16
VPS53-211ENST00000571805 G3V2T6 193 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 STK16O75716 305 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 BCKDHAP12694 445 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 EPORP19235 508 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 GGT5P36269 586 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 IMPG1Q17R60 797 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 GTDC1Q4AE62 458 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 TXNDC8Q6A555 127 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 GRAMD4Q6IC98 578 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 TMEM26Q6ZUK4 368 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 PLPP6Q8IY26 295 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 NAA50Q9GZZ1 169 aaKnown RBP22.28■■□□□ 1.16
VPS53-211ENST00000571805 HMX1Q9NP08 348 aaPredicted RBP22.28■■□□□ 1.16
VPS53-211ENST00000571805 C1orf109Q9NX04 203 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 ZNHIT2Q9UHR6 403 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 CLEC4EQ9ULY5 219 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 CPQQ9Y646 472 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 CXCR6O00574 342 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 SCELO95171 688 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 GALK1P51570 392 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 PHC1P78364 1004 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 TPGS1Q6ZTW0 290 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 GPR26Q8NDV2 337 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 ACDQ96AP0 544 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 SLC47A1Q96FL8 570 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 AURKBQ96GD4 344 aaPredicted RBP22.28■■□□□ 1.16
VPS53-211ENST00000571805 CNDP2Q96KP4 475 aaKnown RBP22.28■■□□□ 1.16
VPS53-211ENST00000571805 RDH12Q96NR8 316 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 OR52E6Q96RD3 313 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 SH3GL1Q99961 368 aa22.28■■□□□ 1.16
VPS53-211ENST00000571805 TBCDQ9BTW9 1192 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms