RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 FUBP1Q96AE4 644 aaKnown RBP16.51■□□□□ 0.23
LITAF-209ENST00000571688 TBC1D20Q96BZ9 403 aa16.51■□□□□ 0.23
LITAF-209ENST00000571688 DEPDC7Q96QD5 511 aa16.51■□□□□ 0.23
LITAF-209ENST00000571688 TMEM246Q9BRR3 403 aa16.51■□□□□ 0.23
LITAF-209ENST00000571688 REXO4Q9GZR2 422 aaKnown RBP16.51■□□□□ 0.23
LITAF-209ENST00000571688 CATSPERBQ9H7T0 1116 aa16.51■□□□□ 0.23
LITAF-209ENST00000571688 EHD3Q9NZN3 535 aa16.51■□□□□ 0.23
LITAF-209ENST00000571688 HACL1Q9UJ83 578 aa16.51■□□□□ 0.23
LITAF-209ENST00000571688 WBP11Q9Y2W2 641 aaKnown RBP16.51■□□□□ 0.23
LITAF-209ENST00000571688 GOLGA8CPA6NN73 597 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 CENPXA8MT69 81 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 HHLA1C9JL84 531 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 CD86P42081 329 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 ZNF280AP59817 542 aaPredicted RBP16.5■□□□□ 0.23
LITAF-209ENST00000571688 GALK2Q01415 458 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 IHHQ14623 411 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 PRSS36Q5K4E3 855 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 RFPL4BQ6ZWI9 263 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 MSRB3Q8IXL7 192 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 CDYL2Q8N8U2 506 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 SLC13A3Q8WWT9 602 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 SYTL2Q9HCH5 934 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.5■□□□□ 0.23
LITAF-209ENST00000571688 MKLN1Q9UL63 735 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
LITAF-209ENST00000571688 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 CDC7O00311 574 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 ABCB1P08183 1280 aaPredicted RBP16.5■□□□□ 0.23
LITAF-209ENST00000571688 MMP2P08253 660 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 CCR1P32246 355 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 MAGEA2P43356 314 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 SETMARQ53H47 684 aaPredicted RBP16.5■□□□□ 0.23
LITAF-209ENST00000571688 WSCD1Q658N2 575 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 PAQR3Q6TCH7 311 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 AHSA2Q719I0 299 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 HCAR2Q8TDS4 363 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 GDF15Q99988 308 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 NUAK2Q9H093 628 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 PDGFCQ9NRA1 345 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 KLK14Q9P0G3 267 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 RAPGEFL1Q9UHV5 662 aa16.5■□□□□ 0.23
LITAF-209ENST00000571688 POLR3HQ9Y535 204 aaPredicted RBP16.5■□□□□ 0.23
LITAF-209ENST00000571688 NCF1BA6NI72 391 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 NCF1CA8MVU1 366 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 SEC22BO75396 215 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 PEX11BO96011 259 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 SERPINA1P01009 418 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 NCF1P14598 390 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 HOXB6P17509 224 aaKnown RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 MAGEA11P43364 429 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 SIRPB2Q5JXA9 342 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 SNAP47Q5SQN1 464 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 NXNL2Q5VZ03 156 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 MRNIPQ6NTE8 343 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 TSPYL5Q86VY4 417 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 NCLNQ969V3 563 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 SDHCQ99643 169 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 SLC25A37Q9NYZ2 338 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 SNX6Q9UNH7 406 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 GRIP1Q9Y3R0 1128 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 PEX16Q9Y5Y5 336 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 MRPL42Q9Y6G3 142 aaKnown RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 ASB14A6NK59 587 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 CAPN5O15484 640 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 WBP4O75554 376 aaKnown RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 SEMA3DO95025 777 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 HTR6P50406 440 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 TSPY1Q01534 308 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 IL1RL1Q01638 556 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 GPR50Q13585 617 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 LAPTM4AQ15012 233 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 PROX2Q3B8N5 592 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 CARD16Q5EG05 197 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 CEP68Q76N32 757 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 HOMEZQ8IX15 550 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 PEX5LQ8IYB4 626 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 TTC29Q8NA56 475 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 PYURFQ96I23 114 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 ZNF382Q96SR6 550 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 CLPBQ9H078 707 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 SLA2Q9H6Q3 261 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 NT5MQ9NPB1 228 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 BOLA1Q9Y3E2 137 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 RECQL5O94762 991 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 CRYZL1O95825 349 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 NAT1P18440 290 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 HOXA9P31269 272 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 HTR7P34969 479 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 P2RX3P56373 397 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 MAXP61244 160 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 C11orf74Q86VG3 221 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 CCDC71Q8IV32 467 aaPredicted RBP16.49■□□□□ 0.23
LITAF-209ENST00000571688 DCBLD1Q8N8Z6 715 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 NETO1Q8TDF5 533 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 MED16Q9Y2X0 877 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 ASB1Q9Y576 335 aa16.49■□□□□ 0.23
LITAF-209ENST00000571688 NPEPPSL1A6NEC2 478 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms