RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 DEPDC1BQ8WUY9 529 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 THAP4Q8WY91 577 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 DNASE2BQ8WZ79 361 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 SHC3Q92529 594 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 SDCCAG3Q96C92 435 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 CABS1Q96KC9 395 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 LMLNQ96KR4 655 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 CCDC114Q96M63 670 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 TRAPPC9Q96Q05 1148 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 GPR63Q9BZJ6 419 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 CLPBQ9H078 707 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 PSTPIP2Q9H939 334 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 COPS7BQ9H9Q2 264 aaPredicted RBP3.56□□□□□ -1.84
CDC27-213ENST00000571643 LIN28AQ9H9Z2 209 aaKnown RBP3.56□□□□□ -1.84
CDC27-213ENST00000571643 ZNF556Q9HAH1 456 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 SEPSECSQ9HD40 501 aaKnown RBP3.56□□□□□ -1.84
CDC27-213ENST00000571643 TCF7L2Q9NQB0 619 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 CGNQ9P2M7 1197 aaKnown RBP3.56□□□□□ -1.84
CDC27-213ENST00000571643 UPB1Q9UBR1 384 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 TBX20Q9UMR3 447 aa3.56□□□□□ -1.84
CDC27-213ENST00000571643 TCF20Q9UGU0 1960 aaKnown RBP3.56□□□□□ -1.84
CDC27-213ENST00000571643 MCM3APO60318 1980 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 KLF18A0A0U1RQI7 1052 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 TAF4O00268 1085 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CACNB4O00305 520 aaPredicted RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 ITM2AO43736 263 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 HBP1O60381 514 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 KERAO60938 352 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 BEST1O76090 585 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CSPG5O95196 566 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 PGM3O95394 542 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 DEXIO95424 95 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CLDN7O95471 211 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 PGK2P07205 417 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CSF1P09603 554 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 RHOXF2BP0C7M4 288 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SUPT20HL2P0C7V6 817 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CHN1P15882 459 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 ARF4P18085 180 aaPredicted RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 SP100P23497 879 aaPredicted RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 PBLDP30039 288 aaPredicted RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 CCND2P30279 289 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CCND3P30281 292 aaPredicted RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 ICAM3P32942 547 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 THPOP40225 353 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 IFNAR2P48551 515 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SULT1E1P49888 294 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 METAP2P50579 478 aaKnown RBP eCLIP3.55□□□□□ -1.84
CDC27-213ENST00000571643 ZNF41P51814 821 aaPredicted RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 PMS2P54278 862 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SLC26A5P58743 744 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CNTN2Q02246 1040 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SLC20A2Q08357 652 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 ZBTB17Q13105 803 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SLC12A1Q13621 1099 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 THOC5Q13769 683 aaKnown RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 NEDD9Q14511 834 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 HNF4GQ14541 408 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 NAA25Q14CX7 972 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 CCL14Q16627 93 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 KYNUQ16719 465 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 KIF19Q2TAC6 998 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 TOR1AIP1Q5JTV8 583 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 KRBOX4Q5JUW0 171 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 ARHGEF16Q5VV41 709 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 NAA35Q5VZE5 725 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 KLHL24Q6TFL4 600 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 BBS12Q6ZW61 710 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 C16orf82Q7Z2V1 217 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 ANKRD33Q7Z3H0 272 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 R3HCC1LQ7Z5L2 792 aaKnown RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 ADSSL1Q8N142 457 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SRBD1Q8N5C6 995 aaKnown RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 ZBTB44Q8NCP5 570 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 KLHDC9Q8NEP7 349 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 TRPV1Q8NER1 839 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 OR1N1Q8NGS0 311 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 OR6Y1Q8NGX8 325 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SCAMP5Q8TAC9 235 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 LMO3Q8TAP4 145 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 C2CD4CQ8TF44 421 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 NCSTNQ92542 709 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 NR4A3Q92570 626 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 PTP4A1Q93096 173 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 FAM120BQ96EK7 910 aaKnown RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 CNDP1Q96KN2 507 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 GLT1D1Q96MS3 346 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 COG8Q96MW5 612 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 INPP4AQ96PE3 977 aaPredicted RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 GBP5Q96PP8 586 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 TMEM237Q96Q45 408 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 FIZ1Q96SL8 496 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 ATP6V0BQ99437 205 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 RHOXF2Q9BQY4 288 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 LLPHQ9BRT6 129 aaKnown RBP3.55□□□□□ -1.84
CDC27-213ENST00000571643 CRACR2AQ9BSW2 395 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 SPXQ9BT56 116 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 ZMYND12Q9H0C1 365 aa3.55□□□□□ -1.84
CDC27-213ENST00000571643 C11orf49Q9H6J7 331 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms