RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PTRHD1Q6GMV3 140 aaKnown RBP13.02□□□□□ -0.33
CCDC40-205ENST00000571028 TRMT10BQ6PF06 316 aaKnown RBP13.02□□□□□ -0.33
CCDC40-205ENST00000571028 NAPRTQ6XQN6 538 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 RCBTB1Q8NDN9 531 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 ZDHHC1Q8WTX9 485 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 APOBEC4Q8WW27 367 aaKnown RBP13.02□□□□□ -0.33
CCDC40-205ENST00000571028 SEC14L1Q92503 715 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 CERS2Q96G23 380 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 ABHD17AQ96GS6 310 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 FAM167BQ9BTA0 163 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 VPS37BQ9H9H4 285 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 PLAC1Q9HBJ0 212 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 SLC17A6Q9P2U8 582 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 NFU1Q9UMS0 254 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 VPS4AQ9UN37 437 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 CRYL1Q9Y2S2 319 aa13.02□□□□□ -0.33
CCDC40-205ENST00000571028 RHPN2P1A8MT19 583 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 PDZK1P1A8MUH7 402 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 GPR89AB7ZAQ6 455 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 PFDN6O15212 129 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 RAD1O60671 282 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 PIAS1O75925 651 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 GPR89BP0CG08 455 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 VCLP18206 1134 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 RPL10P27635 214 aaKnown RBP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 ALDH4A1P30038 563 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 CSTF2P33240 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 SLC1A2P43004 574 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 CSE1LP55060 971 aaKnown RBP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 MAZP56270 477 aaKnown RBP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 LRP8Q14114 963 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 NFE2L1Q14494 772 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 ZNF789Q5FWF6 425 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 ARMC3Q5W041 872 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 FAM83HQ6ZRV2 1179 aaPredicted RBP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 AMZ2Q86W34 360 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 GSPT2Q8IYD1 628 aaKnown RBP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 CFAP206Q8IYR0 622 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 KRT222Q8N1A0 295 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 EFCAB3Q8N7B9 438 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 TEX19Q8NA77 164 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 AGBL5Q8NDL9 886 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 GSDMBQ8TAX9 411 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 CALML6Q8TD86 181 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 PATE1Q8WXA2 126 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 FAM136AQ96C01 138 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 SGSM3Q96HU1 749 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 ZNF514Q96K75 400 aaPredicted RBP13.01□□□□□ -0.33
CCDC40-205ENST00000571028 CCDC74BQ96LY2 380 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 FMO2Q99518 471 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 CCM2Q9BSQ5 444 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 EFHD1Q9BUP0 239 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 PRDM8Q9NQV8 689 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 TBC1D29Q9UFV1 150 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 FBXO5Q9UKT4 447 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 PSMD13Q9UNM6 376 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 PCDHGA3Q9Y5H0 932 aa13.01□□□□□ -0.33
CCDC40-205ENST00000571028 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 IGLV3-16A0A075B6K0 115 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 MGAT4DA6NG13 374 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 EFCAB7A8K855 629 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 BHMG1C9JSJ3 638 aaPredicted RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 PRMT5O14744 637 aaPredicted RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 NKX2-8O15522 239 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 SGTAO43765 313 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 EML2O95834 649 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 OR56A5P0C7T3 313 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 FGF3P11487 239 aaPredicted RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 OGNP20774 298 aaKnown RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 IDSP22304 550 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 CD97P48960 835 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 PPM1FP49593 454 aaPredicted RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 PRLHRP49683 370 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 CDC20Q12834 499 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 CUL1Q13616 776 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 BOP1Q14137 746 aaKnown RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 DEFB109BQ30KR1 87 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 BCL7AQ4VC05 210 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 STEAP4Q687X5 459 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 PACS1Q6VY07 963 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 C3orf62Q6ZUJ4 267 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 C11orf96Q7Z7L8 435 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 FAM129CQ86XR2 697 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 CILP2Q8IUL8 1156 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 LILRA3Q8N6C8 439 aaPredicted RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 GPR150Q8NGU9 434 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 GABPB2Q8TAK5 448 aaPredicted RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 ELMO1Q92556 727 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 SLC45A3Q96JT2 553 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 TIMM29Q9BSF4 260 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 DDA1Q9BW61 102 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 SARS2Q9NP81 518 aaKnown RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 SLC39A1Q9NY26 324 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 GNPTGQ9UJJ9 305 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 TSR3Q9UJK0 312 aaKnown RBP13□□□□□ -0.33
CCDC40-205ENST00000571028 B3GALT1Q9Y5Z6 326 aa13□□□□□ -0.33
CCDC40-205ENST00000571028 IGHV5-10-1A0A0J9YXX1 117 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms