RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TCRBV7S2A1N4TA0A589 114 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 IQCF5A8MTL0 148 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 BTNL10A8MVZ5 291 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 H3BUI4 141 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 KCNK3O14649 394 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 FPGTO14772 594 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 PCDH17O14917 1159 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ALOX15BO15296 676 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 BCAT2O15382 392 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 SEPT4O43236 478 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SHOX2O60902 331 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 ECI2O75521 394 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 WBP4O75554 376 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 SCGB2A1O75556 95 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 PDE5AO76074 875 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RASAL1O95294 804 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 B3GALT4O96024 378 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SERPINA3P01011 423 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 LDLRP01130 860 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 IFNA14P01570 189 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 IL2RAP01589 272 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 IGHEP01854 428 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 APOEP02649 317 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MT-ND5P03915 603 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 IL6P05231 212 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RPLP2P05387 115 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 SCG5P05408 212 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 KRT7P08729 469 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 F3P13726 295 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 AREGP15514 252 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TCF4P15884 667 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 PRKACAP17612 351 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TCP1P17987 556 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 EPORP19235 508 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 EN2P19622 333 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 COMTP21964 271 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TCEA1P23193 301 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 MYF6P23409 242 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 YWHAQP27348 245 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ADH6P28332 368 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 OTX2P32243 289 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 GJC1P36383 396 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ARL1P40616 181 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 CARSP49589 748 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 ENTPD1P49961 510 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SERPINB8P50452 374 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MMP16P51512 607 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SMSP52788 366 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CRYBB1P53674 252 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 RAD23BP54727 409 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CORO7P57737 925 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SELENOVP59797 346 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RPL7AP62424 266 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 VSNL1P62760 191 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 NKX6-1P78426 367 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 MRPS6P82932 125 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 ATP11AP98196 1134 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 OGDHQ02218 1023 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 PTPN11Q06124 597 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 MGAT3Q09327 533 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SCAPQ12770 1279 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MAB21L1Q13394 359 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MESDQ14696 234 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TMEM132DQ14C87 1099 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MED22Q15528 200 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 USF2Q15853 346 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZBTB6Q15916 424 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 DUOXA2Q1HG44 320 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SPRED3Q2MJR0 410 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TCTN1Q2MV58 587 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SGSM1Q2NKQ1 1148 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 PARP6Q2NL67 630 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 WDR72Q3MJ13 1102 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 C3orf36Q3SXR2 165 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 LEXMQ3ZCV2 418 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 NADK2Q4G0N4 442 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 BCL7AQ4VC05 210 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RAB6CQ53S08 254 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZNF667Q5HYK9 610 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 AARS2Q5JTZ9 985 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 TMEM201Q5SNT2 666 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 FAM182AQ5T1J6 154 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZNF385CQ66K41 422 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 PMF1Q6P1K2 205 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CYB5D1Q6P9G0 228 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 EMBQ6PCB8 327 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TTC23LQ6PF05 361 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 KLHL35Q6PF15 583 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 NCEH1Q6PIU2 408 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CES3Q6UWW8 571 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ALKAL1Q6UXT8 129 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RSPO2Q6UXX9 243 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 RNF44Q7L0R7 432 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CHST9Q7L1S5 443 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MON1BQ7L1V2 547 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 PEX26Q7Z412 305 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 USP37Q86T82 979 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SLC51BQ86UW2 128 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 NUDT13Q86X67 352 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CCDC50Q8IVM0 306 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms