RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 UNC5DQ6UXZ4 953 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 NEK10Q6ZWH5 1172 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 UBE2R2Q712K3 238 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 MTERF4Q7Z6M4 381 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 RAB44Q7Z6P3 723 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC22A15Q8IZD6 547 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SPATA6LQ8N4H0 392 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF548Q8NEK5 533 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CFAP61Q8NHU2 1237 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 PPP1R14CQ8TAE6 165 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 FAM76AQ8TAV0 307 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 RNF217Q8TC41 542 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 MGARPQ8TDB4 240 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 LMX1AQ8TE12 382 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 EEF1AKMT1Q8WVE0 214 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARL8AQ96BM9 186 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 TLCD1Q96CP7 247 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CXorf40BQ96DE9 158 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SCARF2Q96GP6 870 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 HIST1H2AHQ96KK5 128 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 C12orf66Q96MD2 445 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 FAM111AQ96PZ2 611 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ELF4Q99607 663 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC30A3Q99726 388 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 HIST1H2AJQ99878 128 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 EGFL8Q99944 293 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 PAIP2Q9BPZ3 127 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 H2AFJQ9BTM1 129 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 LRRC61Q9BV99 259 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 GTPBP2Q9BX10 602 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 UNKQ9C0B0 810 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 TMEM168Q9H0V1 697 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 MRPL46Q9H2W6 279 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 TRIT1Q9H3H1 467 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ALG9Q9H6U8 611 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ERVMER34-1Q9H9K5 563 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 TM7SF3Q9NS93 570 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CD274Q9NZQ7 290 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 GRID1Q9ULK0 1009 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC6A14Q9UN76 642 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 PSMD13Q9UNM6 376 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 RUVBL2Q9Y230 463 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 MED16Q9Y2X0 877 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 TECTAO75443 2155 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC5A10A0PJK1 596 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 NEMP2A6NFY4 417 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 NCF1BA6NI72 391 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR5K4A6NMS3 321 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF839A8K0R7 811 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 NCF1CA8MVU1 366 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 FOXO6A8MYZ6 492 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 H3BQF6 201 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 DLL1O00548 723 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC16A5O15375 505 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRPF4O43172 522 aaKnown RBP eCLIP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZBTB14O43829 449 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 GPC4O75487 556 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLCO2B1O94956 709 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TOP3BO95985 862 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 RETP07949 1114 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 MYL2P10916 166 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 BMP2P12643 396 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 F3P13726 295 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 NCF1P14598 390 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 CD1DP15813 335 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 AK4P27144 223 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 RPL10P27635 214 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 NDUFS1P28331 727 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 EPHA8P29322 1005 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 OAS2P29728 719 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 BDKRB1P46663 353 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 PGGT1BP53609 377 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC18A2Q05940 514 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 ABRQ12979 859 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 C1orf61Q13536 156 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 PLCL1Q15111 1095 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TSNQ15631 228 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 KIF19Q2TAC6 998 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 UAP1L1Q3KQV9 507 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TECRLQ5HYJ1 363 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 LVRNQ6Q4G3 990 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 FAM83HQ6ZRV2 1179 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 C11orf96Q7Z7L8 435 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 CLEC14AQ86T13 490 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 EXOC3L1Q86VI1 746 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 SPATS2Q86XZ4 545 aaKnown RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 GPSM1Q86YR5 675 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 DCUN1D3Q8IWE4 304 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 CENPLQ8N0S6 344 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 LILRA3Q8N6C8 439 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 BANPQ8N9N5 519 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 FAM46DQ8NEK8 389 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRSS33Q8NF86 280 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 C1orf216Q8TAB5 229 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 STAG3L4Q8TBR4 150 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 RDH11Q8TC12 318 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 MCOLN3Q8TDD5 553 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 TCP10LQ8TDR4 215 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 ANKRD49Q8WVL7 239 aa6.43□□□□□ -1.38
CTDNEP1-204ENST00000570484 NXNL1Q96CM4 212 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms