RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 EIF3BP55884 814 aaKnown RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 RHDQ02161 417 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 HSPA14Q0VDF9 509 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 PRKAA1Q13131 559 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 TUBB3Q13509 450 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 DHX34Q14147 1143 aaKnown RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 IL11RAQ14626 422 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 ANKRD20A4Q4UJ75 823 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 RNF187Q5TA31 235 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 KIAA1614Q5VZ46 1190 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 MRNIPQ6NTE8 343 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 FBXO38Q6PIJ6 1188 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 PCSK4Q6UW60 755 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 TMEM135Q86UB9 458 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 AMIGO1Q86WK6 493 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 ADGRF3Q8IZF5 1079 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 NLGN4XQ8N0W4 816 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 IL22RA1Q8N6P7 574 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 SIDT2Q8NBJ9 832 aaKnown RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 NLGN4YQ8NFZ3 816 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 OR5K2Q8NHB8 316 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 LPGAT1Q92604 370 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 RNF31Q96EP0 1072 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 ELMO2Q96JJ3 720 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 BIRC8Q96P09 236 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 PANX3Q96QZ0 392 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 TRIT1Q9H3H1 467 aaKnown RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 XKR8Q9H6D3 395 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 IL1RAPL1Q9NZN1 696 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 ASIC3Q9UHC3 531 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 SNRNP200O75643 2136 aaKnown RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 MAGEB16A2A368 324 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 GSAPA4D1B5 854 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 CTAGE9A4FU28 777 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 ERVH48-1M5A8F1 160 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 ATXN7O15265 892 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-220ENST00000569916 SLCO2B1O94956 709 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 TIAF1O95411 115 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-220ENST00000569916 APOA4P06727 396 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 LIFP15018 202 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 PRDX3P30048 256 aaKnown RBP12.64□□□□□ -0.39
CNOT1-220ENST00000569916 SHMT2P34897 504 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 HSD11B2P80365 405 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 MAP7Q14244 749 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 TMED2Q15363 201 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
CNOT1-220ENST00000569916 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
CNOT1-220ENST00000569916 CYB5D1Q6P9G0 228 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 CENPUQ71F23 418 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 SDCCAG8Q86SQ7 713 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-220ENST00000569916 PPP1R3BQ86XI6 285 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 CILP2Q8IUL8 1156 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 ASZ1Q8WWH4 475 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 TTC9Q92623 222 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 TCF12Q99081 682 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 PITPNM3Q9BZ71 974 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 ULBP3Q9BZM4 244 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 TWSG1Q9GZX9 223 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 C1GALT1Q9NS00 363 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 KCND1Q9NSA2 647 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 POLG2Q9UHN1 485 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 BTRCQ9Y297 605 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 RPS6KL1Q9Y6S9 549 aa12.64□□□□□ -0.39
CNOT1-220ENST00000569916 LOC101059948A0A1B0GTJ6 334 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 C2orf74A8MZ97 194 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 NIPSNAP2O75323 286 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 SPAG6O75602 509 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 USP1O94782 785 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 CDH3P22223 829 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 IVDP26440 423 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 MAP4P27816 1152 aaKnown RBP12.63□□□□□ -0.39
CNOT1-220ENST00000569916 STAT5AP42229 794 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 ARL4DP49703 201 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 ADARP55265 1226 aaKnown RBP12.63□□□□□ -0.39
CNOT1-220ENST00000569916 ACY1Q03154 408 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 ZNF789Q5FWF6 425 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 IZUMO3Q5VZ72 239 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 NEPROQ6NW34 567 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 UNC5AQ6ZN44 842 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 RASGRP3Q8IV61 690 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 KLHL7Q8IXQ5 586 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 MENTQ9BUN1 341 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 PDE7BQ9NP56 450 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 FGF21Q9NSA1 209 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 SOHLH2Q9NX45 425 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 ACTR10Q9NZ32 417 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 RARRES3Q9UL19 164 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 PLAGL1Q9UM63 463 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 TDRKHQ9Y2W6 561 aaKnown RBP12.63□□□□□ -0.39
CNOT1-220ENST00000569916 MAD1L1Q9Y6D9 718 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
CNOT1-220ENST00000569916 ATMQ13315 3056 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms