RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 SIRPGQ9P1W8 387 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 GRID1Q9ULK0 1009 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 OTOGLQ3ZCN5 2332 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 GFYI3L273 518 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 PSIP1O75475 530 aaKnown RBP12.03□□□□□ -0.48
NUP93-220ENST00000569842 C8GP07360 202 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 KCNC1P48547 511 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 OR5AR1Q8NGP9 310 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 MED4Q9NPJ6 270 aa12.03□□□□□ -0.48
NUP93-220ENST00000569842 ZNF624Q9P2J8 865 aaPredicted RBP12.03□□□□□ -0.48
NUP93-220ENST00000569842 PRAMEF33A0A0G2JMD5 474 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 C1orf105O95561 183 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 GIMD1P0DJR0 217 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 MTHFD1P11586 935 aaKnown RBP12.02□□□□□ -0.48
NUP93-220ENST00000569842 HPDP32754 393 aaPredicted RBP12.02□□□□□ -0.48
NUP93-220ENST00000569842 BDKRB1P46663 353 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.48
NUP93-220ENST00000569842 KRT33BQ14525 404 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 PHKG1Q16816 387 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 SBSNQ6UWP8 590 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 UNC5DQ6UXZ4 953 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 ADAMTSL2Q86TH1 951 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 STAG3L4Q8TBR4 150 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 TCP10LQ8TDR4 215 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 FERD3LQ96RJ6 166 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 SSU72Q9NP77 194 aaKnown RBP12.02□□□□□ -0.48
NUP93-220ENST00000569842 UTP6Q9NYH9 597 aaKnown RBP12.02□□□□□ -0.48
NUP93-220ENST00000569842 CPSF2Q9P2I0 782 aaKnown RBP12.02□□□□□ -0.48
NUP93-220ENST00000569842 XPR1Q9UBH6 696 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 CIDEBQ9UHD4 219 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 EMCNQ9ULC0 261 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 RNF112Q9ULX5 631 aa12.02□□□□□ -0.48
NUP93-220ENST00000569842 ARHGEF33A8MVX0 844 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 H3BQF6 201 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 CATP04040 527 aaKnown RBP12.02□□□□□ -0.49
NUP93-220ENST00000569842 RBP1P09455 135 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 SLC2A4P14672 509 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 RPA3P35244 121 aaPredicted RBP12.02□□□□□ -0.49
NUP93-220ENST00000569842 SLC19A1P41440 591 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 MAPK9P45984 424 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 PRKG2Q13237 762 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 TECRLQ5HYJ1 363 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 RASGRP3Q8IV61 690 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 SFRP1Q8N474 314 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 SLC37A2Q8TED4 501 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 EXT2Q93063 718 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 CXorf40BQ96DE9 158 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 SLC12A9Q9BXP2 914 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 PARVBQ9HBI1 364 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 PARD6AQ9NPB6 346 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 PDE10AQ9Y233 779 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 PLLPQ9Y342 182 aa12.02□□□□□ -0.49
NUP93-220ENST00000569842 ZFC3H1O60293 1989 aaKnown RBP12.02□□□□□ -0.49
NUP93-220ENST00000569842 KIR2DS5A0A0G2JLQ3 304 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 A0A0G2JNG1 304 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 KRT87PA6NCN2 255 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 OR5K4A6NMS3 321 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 KIR2DS3K7RE56 304 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 TK2O00142 265 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 SLC16A5O15375 505 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 MAP4P27816 1152 aaKnown RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 SP140Q13342 867 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 MPP2Q14168 576 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 KIR2DS5Q14953 304 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 CSRP2Q16527 193 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 PPP1R3AQ16821 1122 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 CCSMST1Q4G0I0 132 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 FRA10AC1Q70Z53 315 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 GPSM1Q86YR5 675 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 OR5K2Q8NHB8 316 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 RHEBL1Q8TAI7 183 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 FAM111AQ96PZ2 611 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 MRPL57Q9BQC6 102 aaKnown RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 SELENOSQ9BQE4 189 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 MRPL46Q9H2W6 279 aaKnown RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 TRIT1Q9H3H1 467 aaKnown RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 RXFP3Q9NSD7 469 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 TDRKHQ9Y2W6 561 aaKnown RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 HEBP2Q9Y5Z4 205 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 ARHGEF17Q96PE2 2063 aaPredicted RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 TMEM120BA0PK00 339 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 PRPF4O43172 522 aaKnown RBP eCLIP12.01□□□□□ -0.49
NUP93-220ENST00000569842 PCDHGA12O60330 932 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 NOBOXO60393 691 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 KERAO60938 352 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 LRP3O75074 770 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 RPN2P04844 631 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 XRCC1P18887 633 aaPredicted RBP12.01□□□□□ -0.49
NUP93-220ENST00000569842 CYP2A7P20853 494 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 C6orf132Q5T0Z8 1188 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 TRIM48Q8IWZ4 208 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 TBC1D21Q8IYX1 336 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 MCOLN3Q8TDD5 553 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 ATOH8Q96SQ7 321 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 HGH1Q9BTY7 390 aa12.01□□□□□ -0.49
NUP93-220ENST00000569842 NLGN3Q9NZ94 848 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms