RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SLC18A3Q16572 532 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 UGT3A2Q3SY77 523 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 MANEAQ5SRI9 462 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SHEQ5VZ18 495 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 NAA35Q5VZE5 725 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CES4AQ5XG92 561 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 JADE1Q6IE81 842 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PATL1Q86TB9 770 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 BCAS4Q8TDM0 211 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ZNF689Q96CS4 500 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 DCUN1D1Q96GG9 259 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 FCRL4Q96PJ5 515 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 C17orf62Q9BQA9 187 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SAV1Q9H4B6 383 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 SP140LQ9H930 580 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PHPT1Q9NRX4 125 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 CENPMQ9NSP4 180 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 RBM12Q9NTZ6 932 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 VSX1Q9NZR4 365 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 PCDHGA11Q9Y5H2 935 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 TRAV20A0A0B4J274 112 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 EDDM13A0A1B0GTR0 161 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 GRID2IPA4D2P6 1211 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 C12orf71A8MTZ7 269 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KMOO15229 486 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ULK1O75385 1050 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SERPING1P05155 500 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PCCBP05166 539 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 C1SP09871 688 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 WARSP23381 471 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 CLCNKBP51801 687 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ARHGDIAP52565 204 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 VSNL1P62760 191 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PRKAA1Q13131 559 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 MORF4L2Q15014 288 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KYNUQ16719 465 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 TRIM61Q5EBN2 209 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 THEM4Q5T1C6 240 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 FJX1Q86VR8 437 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 FAM131BQ86XD5 332 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ZNF677Q86XU0 584 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 DENND1CQ8IV53 801 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 GSPT2Q8IYD1 628 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 OR8J1Q8NGP2 316 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 NMD3Q96D46 503 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 SGF29Q96ES7 293 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KLHDC7BQ96G42 594 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PCDHB18PQ96TA0 734 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 OSBPL1AQ9BXW6 950 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 BRF2Q9HAW0 419 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CHMP1AQ9HD42 196 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 INTS7Q9NVH2 962 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 DNAJC12Q9UKB3 198 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 TLK1Q9UKI8 766 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PSAT1Q9Y617 370 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SSU72P8A0A1W2PR75 194 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SHISA7A6NL88 538 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PCDH17O14917 1159 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 LIPFP07098 398 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 MAT2AP31153 395 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 ZNF81P51508 661 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PRAMEP78395 509 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SRSF11Q05519 484 aaKnown RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CDKL4Q5MAI5 379 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 C18orf63Q68DL7 685 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SPOPLQ6IQ16 392 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KLHL24Q6TFL4 600 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 DBX2Q6ZNG2 339 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 STRADAQ7RTN6 431 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ZNF551Q7Z340 670 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 GKN2Q86XP6 184 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KLHL7Q8IXQ5 586 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ZZZ3Q8IYH5 903 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CLEC4FQ8N1N0 589 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ATAD1Q8NBU5 361 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 OR8K5Q8NH50 307 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 MYLPFQ96A32 169 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 B3GALT6Q96L58 329 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 TUBGCP5Q96RT8 1024 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CXCL16Q9H2A7 254 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 THSD1Q9NS62 852 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 NUDT15Q9NV35 164 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CRNNQ9UBG3 495 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 HES2Q9Y543 173 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 TIMM13Q9Y5L4 95 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 GRIN2DO15399 1336 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 FAM234BA2RU67 622 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 NDST3O95803 873 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 LGI1O95970 557 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 MBP02144 154 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 HOXB1P14653 301 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 CHRNB2P17787 502 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 AIF1P55008 147 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 LILRA4P59901 499 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 FOXC1Q12948 553 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 TMED2Q15363 201 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CHRNA6Q15825 494 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CSRP2Q16527 193 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 MPEG1Q2M385 716 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms