RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ABCG8Q9H221 673 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 CLEC4MQ9H2X3 399 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 NEUROD4Q9HD90 331 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 KCNJ16Q9NPI9 418 aa9.4□□□□□ -0.9
CAPN3-216ENST00000567071 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 ZNF624Q9P2J8 865 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 PACSIN2Q9UNF0 486 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-216ENST00000567071 C17orf113A0A1B0GUU1 675 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 E7EQ34 232 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 TRAFD1O14545 582 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-216ENST00000567071 CTAG2O75638 210 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 LRIG2O94898 1065 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 RAF1P04049 648 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 TCF4P15884 667 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 COMTP21964 271 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 MSX1P28360 303 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 HALP42357 657 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 MARCKSL1P49006 195 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 TNFSF10P50591 281 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 SCNN1BP51168 640 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF143P52747 638 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-216ENST00000567071 KEAP1Q14145 624 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 CCDC14Q49A88 953 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 SHEQ5VZ18 495 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 PODNL1Q6PEZ8 512 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 C16orf47Q6ZP98 133 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-216ENST00000567071 NLRP8Q86W28 1048 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 GPR135Q8IZ08 494 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 NDUFAF2Q8N183 169 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 RTL3Q8N8U3 475 aaKnown RBP9.39□□□□□ -0.91
CAPN3-216ENST00000567071 TSEN2Q8NCE0 465 aaKnown RBP9.39□□□□□ -0.91
CAPN3-216ENST00000567071 MYRIPQ8NFW9 859 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 FAM172AQ8WUF8 416 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 CNPY3Q9BT09 278 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 TLR10Q9BXR5 811 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 RNF32Q9H0A6 362 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 CARD9Q9H257 536 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 NPDC1Q9NQX5 325 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-216ENST00000567071 RYDENQ9NUL5 291 aaKnown RBP9.39□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF358Q9NW07 568 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 LRFN1Q9P244 771 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 AMFRQ9UKV5 643 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF835Q9Y2P0 537 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 ALG6Q9Y672 507 aa9.39□□□□□ -0.91
CAPN3-216ENST00000567071 ZANQ9Y493 2812 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 FAM90A27PA6NNH2 459 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 SOCS6O14544 535 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 ARHGEF9O43307 516 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 SOCS5O75159 536 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 ALOX12BO75342 701 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 TSPAN12O95859 305 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 LHCGRP22888 699 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 HOXC12P31275 282 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 PTPN9P43378 593 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 RGRP47804 291 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 RENBPP51606 427 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 TAS2R40P59535 323 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 NSUN2Q08J23 767 aaKnown RBP eCLIP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 TUBB8Q3ZCM7 444 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 KRTCAP3Q53RY4 240 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 HMBOX1Q6NT76 420 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 NAPRTQ6XQN6 538 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 NCCRP1Q6ZVX7 275 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 NT5DC3Q86UY8 548 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 OOSP2Q86WS3 158 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 AGAP11Q8TF27 550 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 SCAMP4Q969E2 229 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 COX4I2Q96KJ9 171 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 NAPGQ99747 312 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 GPATCH1Q9BRR8 931 aaKnown RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 AP1M1Q9BXS5 423 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 IL17CQ9P0M4 197 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 CDC23Q9UJX2 597 aa9.38□□□□□ -0.91
CAPN3-216ENST00000567071 MRPS2Q9Y399 296 aaKnown RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 PCYT1BQ9Y5K3 369 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-216ENST00000567071 CTAGE9A4FU28 777 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 NPIPB15A6NHN6 443 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-216ENST00000567071 OR52A4PA6NMU1 304 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 FAM227AF5H4B4 570 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 PRRG2O14669 202 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF749O43361 778 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 VEGFDO43915 354 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 NUAK1O60285 661 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 RNF8O76064 485 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 BRAFP15056 766 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 DESP17661 470 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 MMP11P24347 488 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 EPHB2P29323 1055 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 MIPP30301 263 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 CASQ1P31415 396 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 PREPP48147 710 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 DCDP81605 110 aaKnown RBP9.37□□□□□ -0.91
CAPN3-216ENST00000567071 RPS6KA1Q15418 735 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms