RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SIGLEC11Q96RL6 698 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 CLSTN3Q9BQT9 956 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 EPS8L2Q9H6S3 715 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 SLC25A37Q9NYZ2 338 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 OPTCQ9UBM4 332 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-215ENST00000566843 INVSQ9Y283 1065 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 PKP3Q9Y446 797 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 NOX1Q9Y5S8 564 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 TRPM7Q96QT4 1865 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 METTL15A6NJ78 407 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 A8MU76 341 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 FAM220BPB1ANY3 271 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 SNPHO15079 494 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 RGS10O43665 173 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 DYRK3O43781 588 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 CAPN1P07384 714 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 TCEA1P23193 301 aaKnown RBP15.38■□□□□ 0.05
COMMD4-215ENST00000566843 IGFBP5P24593 272 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 PSMA3P25788 255 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 BMPR1AP36894 532 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 CRYBB1P53674 252 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-215ENST00000566843 TUBA1BP68363 451 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 PLIN5Q00G26 463 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 IL10RBQ08334 325 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 NR6A1Q15406 480 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 TIGD5Q53EQ6 642 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 SLX4IPQ5VYV7 408 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 TWF2Q6IBS0 349 aaKnown RBP15.38■□□□□ 0.05
COMMD4-215ENST00000566843 TUBA1AQ71U36 451 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 DET1Q7L5Y6 550 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 PLD3Q8IV08 490 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 METTL6Q8TCB7 284 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 PPP1R13LQ8WUF5 828 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 CDK15Q96Q40 435 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 SEMA3CQ99985 751 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 ZYG11BQ9C0D3 744 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 VNN3Q9NY84 501 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 CCL27Q9Y4X3 112 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 A3GALT2U3KPV4 340 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 TRBV5-3A0A0A0MS03 114 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 OR2A25A4D2G3 310 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 AREL1O15033 823 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 ASNA1O43681 348 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 PTTG1O95997 202 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 AKT1P31749 480 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 PBX3P40426 434 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 MAGEA2P43356 314 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 GZMMP51124 257 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 ZNF140P52738 457 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-215ENST00000566843 SMU1Q2TAY7 513 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 RFTN2Q52LD8 501 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-215ENST00000566843 CPZQ66K79 652 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 ATG9BQ674R7 924 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 GPRC5AQ8NFJ5 357 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 RPL3LQ92901 407 aaKnown RBP15.38■□□□□ 0.05
COMMD4-215ENST00000566843 ZHX1-C8orf76Q96EF9 292 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 SLC39A13Q96H72 371 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 PDLIM5Q96HC4 596 aaKnown RBP15.38■□□□□ 0.05
COMMD4-215ENST00000566843 SERPINB11Q96P15 392 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 ZBTB18Q99592 522 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 TRPV5Q9NQA5 729 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 ABCB10Q9NRK6 738 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 CD274Q9NZQ7 290 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 SLC45A1Q9Y2W3 748 aa15.38■□□□□ 0.05
COMMD4-215ENST00000566843 MOXD2PA6NHM9 499 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 AGAP5A6NIR3 686 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 MEIS3P2A8K0S8 358 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 EFCAB9A8MZ26 197 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 H0Y626 953 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 PSMD11O00231 422 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 TNFRSF10BO14763 440 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 RECQL5O94762 991 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-215ENST00000566843 TRIM16O95361 564 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 F2P00734 622 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 CASP3P42574 277 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 FPGSQ05932 587 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 GALNT3Q14435 633 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 PCBP2Q15366 365 aaKnown RBP eCLIP15.37■□□□□ 0.051e-11■■■■■ 48
COMMD4-215ENST00000566843 ALFQ53S48 1182 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 C6orf183Q5T699 404 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 UBE2UQ5VVX9 321 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 STEAP3Q658P3 488 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 AFTPHQ6ULP2 937 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 CCDC81Q6ZN84 652 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 LRRC8DQ7L1W4 858 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 NANOGNBQ7Z5D8 188 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 DCBLD1Q8N8Z6 715 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 HTRA1Q92743 480 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 PYURFQ96I23 114 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 ITCHQ96J02 903 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 PPP3R2Q96LZ3 170 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 NXF2Q9GZY0 626 aaKnown RBP15.37■□□□□ 0.05
COMMD4-215ENST00000566843 NMUR1Q9HB89 426 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 MIOSQ9NXC5 875 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 IGLV3-10A0A075B6K4 115 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 VPS26AO75436 327 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 NDUFS3O75489 264 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 GJB3O75712 270 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 FADS2O95864 444 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms