RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 EFHD1Q9BUP0 239 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 NOL11Q9H8H0 719 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 LIMD1Q9UGP4 676 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 MBD1Q9UIS9 605 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 CRLS1Q9UJA2 301 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 COQ6Q9Y2Z9 468 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 PCDHA9Q9Y5H5 950 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 C7orf72A4D263 438 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 ASPDHA6ND91 283 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 AHCYL1O43865 530 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 STAMBPO95630 424 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 RPS3P23396 243 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 SPAM1P38567 509 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 UFM1P61960 85 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 POLR2LP62875 67 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 ERVK-8P63133 956 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 ARHGEF7Q14155 803 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 ITPRIPL2Q3MIP1 535 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 SPATS1Q496A3 300 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 C6orf136Q5SQH8 315 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 EZH1Q92800 747 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 VPS33AQ96AX1 596 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 ZNF597Q96LX8 424 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 CNBD2Q96M20 576 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 CDK15Q96Q40 435 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 LYSMD1Q96S90 227 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 FAM129BQ96TA1 746 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 SPATA16Q9BXB7 569 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 TMEM245Q9H330 911 aa10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 CCM2LQ9NUG4 571 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 CNOT6Q9ULM6 557 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-214ENST00000566633 ANKRD12Q6UB98 2062 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 CXorf51AA0A1B0GTR3 108 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 GRXCR2A6NFK2 248 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 AQP12BA6NM10 295 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ZNF839A8K0R7 811 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ASGR2P07307 311 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 PABPC4LP0CB38 370 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 SMIM18P0DKX4 95 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ZNF7P17097 686 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 MTHFRP42898 656 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 CLCN2P51788 898 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 KCNK10P57789 538 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 BNIP2Q12982 314 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 NRF1Q16656 503 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 C18orf21Q32NC0 220 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 PDCD4Q53EL6 469 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 MTX3Q5HYI7 312 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ZNF648Q5T619 568 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 PTRHD1Q6GMV3 140 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 LETMD1Q6P1Q0 360 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 BRAT1Q6PJG6 821 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 Q7L0L9 218 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 DET1Q7L5Y6 550 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 SNX20Q7Z614 316 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 AMIGO2Q86SJ2 522 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ADAMTSL2Q86TH1 951 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 AQP12AQ8IXF9 295 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 DCBLD1Q8N8Z6 715 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 SUSD6Q92537 303 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ARRDC3Q96B67 414 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 SLC29A1Q99808 456 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 C19orf43Q9BQ61 176 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 CLPBQ9H078 707 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 HEBP1Q9NRV9 189 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 RIC8BQ9NVN3 520 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 PPIL1Q9Y3C6 166 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 TNPO3Q9Y5L0 923 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 AK5Q9Y6K8 562 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 MUC3AQ02505 3323 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 NUP210Q8TEM1 1887 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 MYO15AQ9UKN7 3530 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 C2CD4DB7Z1M9 353 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 OR7A17O14581 309 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 EEDO75530 441 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 BMP2P12643 396 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 SPINT3P49223 89 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 MYBPC1Q00872 1141 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 LRIT3Q3SXY7 679 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 PAGE3Q5JUK9 113 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 LCN8Q6JVE9 175 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 GOLGA7Q7Z5G4 137 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 SPPL2CQ8IUH8 684 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 FAM110BQ8TC76 370 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 LKAAEAR1Q8TD35 194 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 TMEM125Q96AQ2 219 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 C1orf50Q9BV19 199 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 TRIM54Q9BYV2 358 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 PAPOLBQ9NRJ5 636 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 TMEM45AQ9NWC5 275 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ZIM2Q9NZV7 527 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 ACTR3BQ9P1U1 418 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 EGFL7Q9UHF1 273 aa10.59□□□□□ -0.71
PDXDC1-214ENST00000566633 TRBV5-4A0A0C4DH59 114 aa10.58□□□□□ -0.72
PDXDC1-214ENST00000566633 UPK3BL1B0FP48 263 aa10.58□□□□□ -0.72
PDXDC1-214ENST00000566633 UPK3BL2E5RIL1 263 aa10.58□□□□□ -0.72
PDXDC1-214ENST00000566633 FFAR2O15552 330 aa10.58□□□□□ -0.72
PDXDC1-214ENST00000566633 SYNCRIPO60506 623 aaKnown RBP10.58□□□□□ -0.72
PDXDC1-214ENST00000566633 TIPRLO75663 272 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms