RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ELMO3Q96BJ8 720 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CAMKK2Q96RR4 588 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PHOX2BQ99453 314 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NIFKQ9BYG3 293 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 PRKD2Q9BZL6 878 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MMP27Q9H306 513 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TBC1D13Q9NVG8 400 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GLS2Q9UI32 602 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OAZ3Q9UMX2 235 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GJA3Q9Y6H8 435 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 RPS10-NUDT3A0A1W2PQS6 291 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MSH4O15457 936 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 IGHEP01854 428 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 IFNA16P05015 189 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 F8A1P23610 371 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NOS3P29474 1203 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 VAMP7P51809 220 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 LIMK2P53671 638 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NKX3-2P78367 333 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 BTBD16Q32M84 506 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GPR155Q7Z3F1 870 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PRSS42Q7Z5A4 293 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 RNF130Q86XS8 419 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MFSD9Q8NBP5 474 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TRPV1Q8NER1 839 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GOT1L1Q8NHS2 421 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 YIPF5Q969M3 257 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 COL26A1Q96A83 441 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 BDH2Q9BUT1 245 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CCDC32Q9BV29 185 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MKLN1Q9UL63 735 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ATP6V1G2-DDX39BF2Z307 99 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SLCO1B7G3V0H7 640 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MRPS14O60783 128 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 CDH5P33151 784 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 LIMK1P53667 647 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 HNF4GQ14541 408 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TANGO2Q6ICL3 276 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TIGD7Q6NT04 549 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 BRAT1Q6PJG6 821 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TCTE3Q8IZS6 198 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OR8H3Q8N146 312 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMEM199Q8N511 208 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OR7G3Q8NG95 312 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CLHC1Q8NHS4 586 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 C15orf40Q8WUR7 153 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FBXW5Q969U6 566 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ZNF566Q969W8 418 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 BCL2L14Q9BZR8 327 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 AMBRA1Q9C0C7 1298 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FAM83DQ9H4H8 585 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MRPL47Q9HD33 250 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 COA4Q9NYJ1 87 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SPACA6W5XKT8 324 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 KDM3BQ7LBC6 1761 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 LOC100506127A0A0U1RQW1 187 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 USP2O75604 605 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 PAHP00439 452 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NUDT7P0C024 238 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MLNP12872 115 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 COX10Q12887 443 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ZNF404Q494X3 552 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GPAT3Q53EU6 434 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 C2CD6Q53TS8 623 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CMC1Q7Z7K0 106 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 WDR18Q9BV38 432 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FAM117AQ9C073 453 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PPA2Q9H2U2 334 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 RC3H2Q9HBD1 1191 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 GPATCH2LQ9NWQ4 482 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NUFIP1Q9UHK0 495 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 PEX16Q9Y5Y5 336 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TJP1Q07157 1748 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 YLPM1P49750 1951 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 PLCH1Q4KWH8 1693 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TOR1AO14656 332 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ITGA10O75578 1167 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PGLSO95336 258 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 F9P00740 461 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 C1QBP02746 253 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GP5P40197 560 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GLO1Q04760 184 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PMPCAQ10713 525 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TKFCQ3LXA3 575 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 KLHL12Q53G59 568 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PPP1R26Q5T8A7 1209 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 COMMD7Q86VX2 200 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PTP4A1Q93096 173 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ASIC4Q96FT7 647 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OR2A14Q96R47 310 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NPAS2Q99743 824 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FBXO28Q9NVF7 368 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 UBDO15205 165 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 XPNPEP2O43895 674 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OR7A10O76100 309 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CNTN5O94779 1100 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ALDOAP04075 364 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 SLC2A3P11169 496 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NCK1P16333 377 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MAP2K4P45985 399 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms