RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 GRAMD1AQ96CP6 724 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 WWOXQ9NZC7 414 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 PNMA8BQ9ULN7 279 aaPredicted RBP18.3■□□□□ 0.52
COMMD4-213ENST00000565834 PSMD13Q9UNM6 376 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 TNPO3Q9Y5L0 923 aaKnown RBP18.3■□□□□ 0.52
COMMD4-213ENST00000565834 DGKBQ9Y6T7 804 aa18.3■□□□□ 0.52
COMMD4-213ENST00000565834 SPAG17Q6Q759 2223 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 FANCMQ8IYD8 2048 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 A0A1W2PR77 199 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 LRRC14BA6NHZ5 514 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 PRR19A6NJB7 356 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 IFRD1O00458 451 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-213ENST00000565834 RASGRP1O95267 797 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 RPS17P08708 135 aaKnown RBP18.29■□□□□ 0.52
COMMD4-213ENST00000565834 IDSP22304 550 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 CCR10P46092 362 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 BDKRB1P46663 353 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 CLCNKAP51800 687 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 NAA20P61599 178 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 OVGP1Q12889 678 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 FZD2Q14332 565 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 FBXO48Q5FWF7 155 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.29■□□□□ 0.52
COMMD4-213ENST00000565834 ANKS6Q68DC2 871 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 MBOAT1Q6ZNC8 495 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 IQCHQ86VS3 1027 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 RGL4Q8IZJ4 473 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-213ENST00000565834 RHBDF1Q96CC6 855 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 RMDN2Q96LZ7 410 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 SORT1Q99523 831 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 TRMOQ9BU70 441 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 C1QTNF3Q9BXJ4 246 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 ZDHHC5Q9C0B5 715 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 WWP1Q9H0M0 922 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 GSTO2Q9H4Y5 243 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 TM9SF3Q9HD45 589 aa18.29■□□□□ 0.52
COMMD4-213ENST00000565834 PTBP2Q9UKA9 531 aaKnown RBP18.29■□□□□ 0.52
COMMD4-213ENST00000565834 SNUPNO95149 360 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 C1orf105O95561 183 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TNFP01375 233 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 CHRNGP07510 517 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 RPL10P27635 214 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 CTBSQ01459 385 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ARL13AQ5H913 290 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 RPS27LQ71UM5 84 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ARMCX6Q7L4S7 300 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 C11orf74Q86VG3 221 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 PARGQ86W56 976 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TCAIMQ8N3R3 496 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 FBXO15Q8NCQ5 510 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ZNF473Q8WTR7 871 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 UBTD2Q8WUN7 234 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 DNASE2BQ8WZ79 361 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ELAC2Q9BQ52 826 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TMEM168Q9H0V1 697 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TRNAU1APQ9NX07 287 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ASF1AQ9Y294 204 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 KNL1Q8NG31 2342 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TAPBPO15533 448 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 WNT1P04628 370 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TROVE2P10155 538 aaKnown RBP eCLIP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 HNMTP50135 292 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 EIF2B5Q13144 721 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 PCBP2Q15366 365 aaKnown RBP eCLIP18.28■□□□□ 0.521e-11■■■■■ 48
COMMD4-213ENST00000565834 C18orf21Q32NC0 220 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 CGB2Q6NT52 195 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ATG14Q6ZNE5 492 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 LSMEM2Q8N112 164 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 FBXL6Q8N531 539 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 C1orf216Q8TAB5 229 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 GAB3Q8WWW8 586 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TFGQ92734 400 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 ESAMQ96AP7 390 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 EML4Q9HC35 981 aaKnown RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 PCTPQ9UKL6 214 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 FBXO4Q9UKT5 387 aa18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TP53BP1Q12888 1972 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-213ENST00000565834 TDRD6O60522 2096 aaKnown RBP18.27■□□□□ 0.52
COMMD4-213ENST00000565834 PDZK1P1A8MUH7 402 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 RPN2P04844 631 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 HSPA7P48741 367 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 PRKAA1Q13131 559 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 CAPRIN2Q6IMN6 1127 aaKnown RBP18.27■□□□□ 0.52
COMMD4-213ENST00000565834 TTC23LQ6PF05 361 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 LAYNQ6UX15 382 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 MAGEC3Q8TD91 643 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 ZNF483Q8TF39 744 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-213ENST00000565834 FBXL8Q96CD0 374 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 CCDC138Q96M89 665 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 NSUN5Q96P11 429 aaKnown RBP18.27■□□□□ 0.52
COMMD4-213ENST00000565834 TMEM79Q9BSE2 394 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 TRIM55Q9BYV6 548 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 ILKAPQ9H0C8 392 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-213ENST00000565834 WDR37Q9Y2I8 494 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 RAP2CQ9Y3L5 183 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 ASB1Q9Y576 335 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 ST14Q9Y5Y6 855 aa18.27■□□□□ 0.52
COMMD4-213ENST00000565834 SDK1Q7Z5N4 2213 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms